Conjunctive Analyses of BSA-Seq and BSR-Seq to Reveal the Molecular Pathway of Leafy Head Formation in Chinese Cabbage

Whole-genome resequencing from bulked-segregant analysis reveals gene set based association analyses for the Vibrio anguillarum resistance of turbot (Scophthalmus maximus)

(2019) Kai Zhang et al.   FISH & SHELLFISH IMMUNOLOGY

Transcription Coactivator ANGUSTIFOLIA3 (AN3) Regulates Leafy Head Formation in Chinese Cabbage

(2019) Jing Yu et al.   Frontiers in Plant Science

Identification and Molecular Mapping of a Gummy Stem Blight Resistance Gene in Wild Watermelon (Citrullus amarus) Germplasm PI 189225

(2019) Runsheng Ren et al.   PLANT DISEASE

Jasmonates in plants under abiotic stresses: Crosstalk with other phytohormones matters

(2018) Tasir S. Per et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Molecular characterisation and expression profiling of calcineurin B-like (CBL) genes in Chinese cabbage under abiotic stresses

(2017) Hee-Jeong Jung et al.   FUNCTIONAL PLANT BIOLOGY

Jasmonate signaling and manipulation by pathogens and insects

(2017) Li Zhang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Coupling Seq-BSA and RNA-Seq Analyses Reveal the Molecular Pathway and Genes Associated with Heading Type in Chinese Cabbage

(2017) AiXia Gu et al.   Frontiers in Genetics

Genome-wide analysis of auxin transport genes identifies the hormone responsive patterns associated with leafy head formation in Chinese cabbage

(2017) Li-wei Gao et al.   Scientific Reports

Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea

(2016) Feng Cheng et al.   NATURE GENETICS

Jasmonate signaling in plant stress responses and development – active and inactive compounds

(2016) Claus Wasternack et al.   New Biotechnology

Characterization of the calcineurin B-Like (CBL) gene family in maize and functional analysis of ZmCBL9 under abscisic acid and abiotic stress treatments

(2016) Fan Zhang et al.   PLANT SCIENCE

Arabidopsis casein kinase 1-like 8 enhances NaCl tolerance, early flowering, and the expression of flowering-related genes

(2016) Ji-hong Zhang et al.   Journal of Plant Interactions

Investigation of Genes Encoding Calcineurin B-Like Protein Family in Legumes and Their Expression Analyses in Chickpea (Cicer arietinum L.)

(2015) Mukesh Kumar Meena et al.   PLoS One

Casein Kinase 1 Regulates Ethylene Synthesis by Phosphorylating and Promoting the Turnover of ACS5

(2014) Shu-Tang Tan et al.   Cell Reports

BSTA: a targeted approach combines bulked segregant analysis with next- generation sequencing and de novo transcriptome assembly for SNP discovery in sunflower

(2013) Maren Livaja et al.   BMC GENOMICS

The ULT1 and ULT2 trxG Genes Play Overlapping Roles in Arabidopsis Development and Gene Regulation

(2013) Mona M. Monfared et al.   Molecular Plant

BrpSPL9(Brassica rapassp.pekinensis SPL9) controls the earliness of heading time in Chinese cabbage

(2013) Yali Wang et al.   PLANT BIOTECHNOLOGY JOURNAL

Arabidopsis Casein Kinase1 Proteins CK1.3 and CK1.4 Phosphorylate Cryptochrome2 to Regulate Blue Light Signaling

(2013) S.-T. Tan et al.   PLANT CELL

QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations

(2013) Hiroki Takagi et al.   PLANT JOURNAL

microRNA319a-Targeted Brassica rapa ssp. pekinensis TCP Genes Modulate Head Shape in Chinese Cabbage by Differential Cell Division Arrest in Leaf Regions

(2013) Y. Mao et al.   PLANT PHYSIOLOGY

Genome-wide association studies for agronomical traits in a world wide spring barley collection

(2012) Raj K Pasam et al.   BMC PLANT BIOLOGY

A Local Maximum in Gibberellin Levels Regulates Maize Leaf Growth by Spatial Control of Cell Division

(2012) Hilde Nelissen et al.   CURRENT BIOLOGY

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

Leaf adaxial-abaxial polarity specification and lamina outgrowth: evolution and development

(2012) T. Yamaguchi et al.   PLANT AND CELL PHYSIOLOGY

Gene Mapping via Bulked Segregant RNA-Seq (BSR-Seq)

(2012) Sanzhen Liu et al.   PLoS One

Ethylene-induced differential petiole growth in Arabidopsis thaliana involves local microtubule reorientation and cell expansion

(2011) Joanna K. Polko et al.   NEW PHYTOLOGIST

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Classification and quantification of leaf curvature

(2010) Zhongyuan Liu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Activation of gibberellin 2-oxidase 6 decreases active gibberellin levels and creates a dominant semi-dwarf phenotype in rice (Oryza sativa L.)

(2010) Jian Huang et al.   Journal of Genetics and Genomics

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

The milkweed pod1 Gene Encodes a KANADI Protein That Is Required for Abaxial/Adaxial Patterning in Maize Leaves

(2008) H. Candela et al.   PLANT CELL