The microbiome modulating activity of bile acids

The ‘in vivo lifestyle’ of bile acid 7α-dehydroxylating bacteria: comparative genomics, metatranscriptomic, and bile acid metabolomics analysis of a defined microbial community in gnotobiotic mice

(2019) Jason M. Ridlon et al.   Gut Microbes

New insights into bacterial bile resistance mechanisms: the role of bile salt hydrolase and its impact on human health

(2018) Ana Y. Bustos et al.   FOOD RESEARCH INTERNATIONAL

Vitamin A deficiency in mice alters host and gut microbial metabolism leading to altered energy homeostasis

(2018) Yuan Tian et al.   JOURNAL OF NUTRITIONAL BIOCHEMISTRY

Gut microbiome–mediated bile acid metabolism regulates liver cancer via NKT cells

(2018) Chi Ma et al.   SCIENCE

Extensive impact of non-antibiotic drugs on human gut bacteria

(2018) Lisa Maier et al.   NATURE

Berberine Directly Affects the Gut Microbiota to Promote Intestinal Farnesoid X Receptor Activation

(2018) Yuan Tian et al.   DRUG METABOLISM AND DISPOSITION

Gut microbiota and intestinal FXR mediate the clinical benefits of metformin

(2018) Lulu Sun et al.   NATURE MEDICINE

Multiplatform Physiologic and Metabolic Phenotyping Reveals Microbial Toxicity

(2018) Jingwei Cai et al.   mSystems

In Vitro Antibacterial Activity of Unconjugated and Conjugated Bile Salts on Staphylococcus aureus

(2017) Thippeswamy H. Sannasiddappa et al.   Frontiers in Microbiology

Metabolomic Profiling of the Malaria Box Reveals Antimalarial Target Pathways

(2016) Erik L. Allman et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Intestinal Crosstalk between Bile Acids and Microbiota and Its Impact on Host Metabolism

(2016) Annika Wahlström et al.   Cell Metabolism

Antibiotic Resistance and Regulation of the Gram-Negative Bacterial Outer Membrane Barrier by Host Innate Immune Molecules

(2016) Samuel I. Miller   mBio

Bile Acid Profiling and Quantification in Biofluids Using Ultra-Performance Liquid Chromatography Tandem Mass Spectrometry

(2015) Magali H. Sarafian et al.   ANALYTICAL CHEMISTRY

MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis

(2015) Hiroshi Tsugawa et al.   NATURE METHODS

Farnesoid X receptor inhibits glucagon-like peptide-1 production by enteroendocrine L cells

(2015) Mohamed-Sami Trabelsi et al.   Nature Communications

The human gut sterolbiome: bile acid-microbiome endocrine aspects and therapeutics

(2015) Jason M. Ridlon et al.   Acta Pharmaceutica Sinica B

supraHex: An R/Bioconductor package for tabular omics data analysis using a supra-hexagonal map

(2013) Hai Fang et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Xenobiotics Shape the Physiology and Gene Expression of the Active Human Gut Microbiome

(2013) Corinne Ferrier Maurice et al.   CELL

Microbiome remodelling leads to inhibition of intestinal farnesoid X receptor signalling and decreased obesity

(2013) Fei Li et al.   Nature Communications

Bile resistance mechanisms in Lactobacillus and Bifidobacterium

(2013) Lorena Ruiz et al.   Frontiers in Microbiology

MetaMapp: mapping and visualizing metabolomic data by integrating information from biochemical pathways and chemical and mass spectral similarity

(2012) Dinesh K Barupal et al.   BMC BIOINFORMATICS

Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon

(2012) Xiaolei Ze et al.   ISME Journal

Gallic Acid Intake Induces Alterations to Systems Metabolism in Rats

(2012) Xiaohuo Shi et al.   JOURNAL OF PROTEOME RESEARCH

Age-Related Topographical Metabolic Signatures for the Rat Gastrointestinal Contents

(2011) Yuan Tian et al.   JOURNAL OF PROTEOME RESEARCH

Human gut microbiome adopts an alternative state following small bowel transplantation

(2009) A. L. Hartman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bile-acid-induced cell injury and protection

(2009) Maria J Perez et al.   WORLD JOURNAL OF GASTROENTEROLOGY