GADMA: Genetic algorithm for inferring demographic history of multiple populations from allele frequency spectrum data

GADMA: Genetic algorithm for inferring demographic history of multiple populations from allele frequency spectrum data

(2020) Ekaterina Noskova et al.   GigaScience

Efficiently Inferring the Demographic History of Many Populations With Allele Count Data

(2019) Jack Kamm et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Using Genomic Data to Infer Historic Population Dynamics of Nonmodel Organisms

(2018) Annabel C. Beichman et al.   Annual Review of Ecology Evolution and Systematics

Geometry of the Sample Frequency Spectrum and the Perils of Demographic Inference

(2018) Zvi Rosen et al.   GENETICS

Inferring Demographic History Using Two-Locus Statistics

(2017) Aaron P. Ragsdale et al.   GENETICS

Inferring the Joint Demographic History of Multiple Populations: Beyond the Diffusion Approximation

(2017) Julien Jouganous et al.   GENETICS

Evaluating mechanisms of diversification in a Guineo-Congolian tropical forest frog using demographic model selection

(2017) Daniel M. Portik et al.   MOLECULAR ECOLOGY

Inferring Demographic History Using Two-Locus Statistics

(2017) Aaron P. Ragsdale et al.   GENETICS

Inferring the Joint Demographic History of Multiple Populations: Beyond the Diffusion Approximation

(2017) Julien Jouganous et al.   GENETICS

Divergence of character and premature convergence: A survey of methodologies for promoting diversity in evolutionary optimization

(2016) Giovanni Squillero et al.   INFORMATION SCIENCES

Ancient Human Migration after Out-of-Africa

(2016) Daniel Shriner et al.   Scientific Reports

On the importance of being structured: instantaneous coalescence rates and human evolution—lessons for ancestral population size inference?

(2015) O Mazet et al.   HEREDITY

Computationally Efficient Composite Likelihood Statistics for Demographic Inference

(2015) Alec J. Coffman et al.   MOLECULAR BIOLOGY AND EVOLUTION

Methods and models for unravelling human evolutionary history

(2015) Joshua G. Schraiber et al.   NATURE REVIEWS GENETICS

Fundamental limits on the accuracy of demographic inference based on the sample frequency spectrum

(2015) Jonathan Terhorst et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DIYABC v2.0: a software to make approximate Bayesian computation inferences about population history using single nucleotide polymorphism, DNA sequence and microsatellite data

(2014) Jean-Marie Cornuet et al.   BIOINFORMATICS

Inferring human population size and separation history from multiple genome sequences

(2014) Stephan Schiffels et al.   NATURE GENETICS

Genome-wide genotype and sequence-based reconstruction of the 140,000 year history of modern human ancestry

(2014) Daniel Shriner et al.   Scientific Reports

Genomic inference accurately predicts the timing and severity of a recent bottleneck in a nonmodel insect population

(2013) Rajiv C. McCoy et al.   MOLECULAR ECOLOGY

Ancestral Genome Inference Using a Genetic Algorithm Approach

(2013) Nan Gao et al.   PLoS One

Sequencing Y Chromosomes Resolves Discrepancy in Time to Common Ancestor of Males Versus Females

(2013) G. D. Poznik et al.   SCIENCE

Inferring Demographic History from a Spectrum of Shared Haplotype Lengths

(2013) Kelley Harris et al.   PLoS Genetics

Population Genetics Models of Local Ancestry

(2012) S. Gravel   GENETICS

On the practical usage of genetic algorithms in ecology and evolution

(2012) Steven Hamblin   Methods in Ecology and Evolution

A Revised Root for the Human Y Chromosomal Phylogenetic Tree: The Origin of Patrilineal Diversity in Africa

(2011) Fulvio Cruciani et al.   AMERICAN JOURNAL OF HUMAN GENETICS

fastsimcoal: a continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios

(2011) Laurent Excoffier et al.   BIOINFORMATICS

Demographic history and rare allele sharing among human populations

(2011) S. Gravel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Population genetic inference from genomic sequence variation

(2010) J. E. Pool et al.   GENOME RESEARCH

Working toward a synthesis of archaeological, linguistic, and genetic data for inferring African population history

(2010) L. B. Scheinfeldt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Inferring the Joint Demographic History of Multiple Populations from Multidimensional SNP Frequency Data

(2009) Ryan N. Gutenkunst et al.   PLoS Genetics

Can one learn history from the allelic spectrum?

(2008) Simon Myers et al.   THEORETICAL POPULATION BIOLOGY