Spatial and temporal patterns of environmental DNA detection to inform sampling protocols in lentic and lotic systems

Demography, Habitat, and Movements of the Sierra Nevada Yellow-Legged Frog (Rana sierrae) in Streams

(2019) Cathy Brown et al.   COPEIA

Hybridization between two parapatric ranid frog species in the northern Sierra Nevada, California, USA

(2019) Ryan A. Peek et al.   MOLECULAR ECOLOGY

Concentrations of environmental DNA (eDNA) reflect spawning salmon abundance at fine spatial and temporal scales

(2018) Michael D. Tillotson et al.   BIOLOGICAL CONSERVATION

Degradation and dispersion limit environmental DNA detection of rare amphibians in wetlands: Increasing efficacy of sampling designs

(2018) Caren S. Goldberg et al.   SCIENCE OF THE TOTAL ENVIRONMENT

ANDe™ : A fully integrated environmental DNA sampling system

(2018) Austen C. Thomas et al.   Methods in Ecology and Evolution

An issue of life or death: using eDNA to detect viable individuals in wilderness restoration

(2018) Colleen Kamoroff et al.   Freshwater Science

An issue of life or death: using eDNA to detect viable individuals in wilderness restoration

(2018) Colleen Kamoroff et al.   Freshwater Science

Variation in thermal niche of a declining river-breeding frog: From counter-gradient responses to population distribution patterns

(2017) Alessandro Catenazzi et al.   FRESHWATER BIOLOGY

eDNA metabarcoding: a promising method for anuran surveys in highly diverse tropical forests

(2017) Carla M. Lopes et al.   Molecular Ecology Resources

Is the detection of aquatic environmental DNA influenced by substrate type?

(2017) Andrew S. Buxton et al.   PLoS One

Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity

(2017) Iliana Bista et al.   Nature Communications

Rapid extirpation of a North American frog coincides with an increase in fungal pathogen prevalence: Historical analysis and implications for reintroduction

(2017) Andrea J. Adams et al.   Ecology and Evolution

A Basic Guide to Real Time PCR in Microbial Diagnostics: Definitions, Parameters, and Everything

(2017) Petr Kralik et al.   Frontiers in Microbiology

Seasonal variation in environmental DNA in relation to population size and environmental factors

(2017) Andrew S. Buxton et al.   Scientific Reports

Understanding environmental DNA detection probabilities: A case study using a stream-dwelling char Salvelinus fontinalis

(2016) Taylor M. Wilcox et al.   BIOLOGICAL CONSERVATION

Influence of Stream Bottom Substrate on Retention and Transport of Vertebrate Environmental DNA

(2016) Christopher L. Jerde et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Critical considerations for the application of environmental DNA methods to detect aquatic species

(2016) Caren S. Goldberg et al.   Methods in Ecology and Evolution

Spatial Representativeness of Environmental DNA Metabarcoding Signal for Fish Biodiversity Assessment in a Natural Freshwater System

(2016) Raphaël Civade et al.   PLoS One

Potential of Environmental DNA to Evaluate Northern Pike (Esox lucius) Eradication Efforts: An Experimental Test and Case Study

(2016) Kristine J. Dunker et al.   PLoS One

Environmental DNA (eDNA) Detection Probability Is Influenced by Seasonal Activity of Organisms

(2016) Lesley S. de Souza et al.   PLoS One

Characterizing the distribution of an endangered salmonid using environmental DNA analysis

(2015) Matthew B. Laramie et al.   BIOLOGICAL CONSERVATION

Quantifying effects of UV-B, temperature, and pH on eDNA degradation in aquatic microcosms

(2015) Katherine M. Strickler et al.   BIOLOGICAL CONSERVATION

Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

(2015) Philip Francis Thomsen et al.   BIOLOGICAL CONSERVATION

The ecology of environmental DNA and implications for conservation genetics

(2015) Matthew A. Barnes et al.   CONSERVATION GENETICS

Fishing in the Water: Effect of Sampled Water Volume on Environmental DNA-Based Detection of Macroinvertebrates

(2015) Elvira Mächler et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Applications and limitations of measuring environmental DNA as indicators of the presence of aquatic animals

(2015) Helen C. Rees et al.   JOURNAL OF APPLIED ECOLOGY

A basin-scale application of environmental DNA assessment for rare endemic species and closely related exotic species in rivers: a case study of giant salamanders in Japan

(2015) Sou Fukumoto et al.   JOURNAL OF APPLIED ECOLOGY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Optimizing techniques to capture and extract environmental DNA for detection and quantification of fish

(2015) Jessica J. Eichmiller et al.   Molecular Ecology Resources

A framework for estimating the sensitivity of eDNA surveys

(2015) Elise M. Furlan et al.   Molecular Ecology Resources

Environmental DNA (eDNA) Sampling Improves Occurrence and Detection Estimates of Invasive Burmese Pythons

(2015) Margaret E. Hunter et al.   PLoS One

Modeling the Sensitivity of Field Surveys for Detection of Environmental DNA (eDNA)

(2015) Martin T. Schultz et al.   PLoS One

Environmental Conditions Influence eDNA Persistence in Aquatic Systems

(2014) Matthew A. Barnes et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Distance, flow and PCR inhibition: eDNA dynamics in two headwater streams

(2014) Stephen F. Jane et al.   Molecular Ecology Resources

Transport Distance of Invertebrate Environmental DNA in a Natural River

(2014) Kristy Deiner et al.   PLoS One

Assessing Environmental DNA Detection in Controlled Lentic Systems

(2014) Gregory R. Moyer et al.   PLoS One

The Relationship between the Distribution of Common Carp and Their Environmental DNA in a Small Lake

(2014) Jessica J. Eichmiller et al.   PLoS One

Particle size distribution and optimal capture of aqueous macrobial eDNA

(2014) Cameron R. Turner et al.   Methods in Ecology and Evolution

The application of eDNA for monitoring of the Great Crested Newt in the UK

(2014) Helen C. Rees et al.   Ecology and Evolution

Estimating occupancy and abundance of stream amphibians using environmental DNA from filtered water samples

(2013) David S. Pilliod et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Trends in Amphibian Occupancy in the United States

(2013) Michael J. Adams et al.   PLoS One

Environmental DNA as a new method for early detection of New Zealand mudsnails (Potamopyrgus antipodarum)

(2013) Caren S. Goldberg et al.   Freshwater Science

Conservation in a cup of water: estimating biodiversity and population abundance from environmental DNA

(2012) DAVID M. LODGE et al.   MOLECULAR ECOLOGY

Estimation of Fish Biomass Using Environmental DNA

(2012) Teruhiko Takahara et al.   PLoS One

Monitoring endangered freshwater biodiversity using environmental DNA

(2011) PHILIP FRANCIS THOMSEN et al.   MOLECULAR ECOLOGY

Molecular Detection of Vertebrates in Stream Water: A Demonstration Using Rocky Mountain Tailed Frogs and Idaho Giant Salamanders

(2011) Caren S. Goldberg et al.   PLoS One

Persistence of Environmental DNA in Freshwater Ecosystems

(2011) Tony Dejean et al.   PLoS One

“Sight-unseen” detection of rare aquatic species using environmental DNA

(2011) Christopher L. Jerde et al.   Conservation Letters

Rangewide phylogeography and landscape genetics of the Western U.S. endemic frog Rana boylii (Ranidae): implications for the conservation of frogs and rivers

(2010) Amy J. Lind et al.   CONSERVATION GENETICS

Dynamics of an emerging disease drive large-scale amphibian population extinctions

(2010) V. T. Vredenburg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Species detection using environmental DNA from water samples

(2008) G. F. Ficetola et al.   Biology Letters