Optimizing techniques to capture and extract environmental DNA for detection and quantification of fish

Choice of capture and extraction methods affect detection of freshwater biodiversity from environmental DNA

(2015) Kristy Deiner et al.   BIOLOGICAL CONSERVATION

Quantification of eDNA shedding rates from invasive bighead carp Hypophthalmichthys nobilis and silver carp Hypophthalmichthys molitrix

(2015) Katy E. Klymus et al.   BIOLOGICAL CONSERVATION

Using environmental DNA methods to improve detectability in a hellbender (Cryptobranchus alleganiensis) monitoring program

(2015) Stephen F. Spear et al.   BIOLOGICAL CONSERVATION

The effect of dilution and the use of a post-extraction nucleic acid purification column on the accuracy, precision, and inhibition of environmental DNA samples

(2015) Anna M. McKee et al.   BIOLOGICAL CONSERVATION

Moving environmental DNA methods from concept to practice for monitoring aquatic macroorganisms

(2015) Caren S. Goldberg et al.   BIOLOGICAL CONSERVATION

Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

(2015) Philip Francis Thomsen et al.   BIOLOGICAL CONSERVATION

Using eDNA to develop a national citizen science-based monitoring programme for the great crested newt (Triturus cristatus)

(2015) Jeremy Biggs et al.   BIOLOGICAL CONSERVATION

A multiplexed droplet digital PCR assay performs better than qPCR on inhibition prone samples

(2014) Ruth Hall Sedlak et al.   DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE

Environmental Conditions Influence eDNA Persistence in Aquatic Systems

(2014) Matthew A. Barnes et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Environmental DNA surveillance for invertebrate species: advantages and technical limitations to detect invasive crayfishProcambarus clarkiiin freshwater ponds

(2014) Anne Tréguier et al.   JOURNAL OF APPLIED ECOLOGY

Distance, flow and PCR inhibition: eDNA dynamics in two headwater streams

(2014) Stephen F. Jane et al.   Molecular Ecology Resources

The room temperature preservation of filtered environmental DNA samples and assimilation into a phenol-chloroform-isoamyl alcohol DNA extraction

(2014) Mark A. Renshaw et al.   Molecular Ecology Resources

The Impact of Different DNA Extraction Kits and Laboratories upon the Assessment of Human Gut Microbiota Composition by 16S rRNA Gene Sequencing

(2014) Nicholas A. Kennedy et al.   PLoS One

The Relationship between the Distribution of Common Carp and Their Environmental DNA in a Small Lake

(2014) Jessica J. Eichmiller et al.   PLoS One

Particle size distribution and optimal capture of aqueous macrobial eDNA

(2014) Cameron R. Turner et al.   Methods in Ecology and Evolution

Estimating occupancy and abundance of stream amphibians using environmental DNA from filtered water samples

(2013) David S. Pilliod et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Detection of Asian carp DNA as part of a Great Lakes basin-wide surveillance program

(2013) Christopher L. Jerde et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Filtration Recovery of Extracellular DNA from Environmental Water Samples

(2013) Zhanbei Liang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Factors influencing detection of eDNA from a stream-dwelling amphibian

(2013) David S. Pilliod et al.   Molecular Ecology Resources

Validation of eDNA Surveillance Sensitivity for Detection of Asian Carps in Controlled and Field Experiments

(2013) Andrew R. Mahon et al.   PLoS One

An eDNA approach to detect eastern hellbenders (Cryptobranchus a. alleganiensis) using samples of water

(2013) Zachary H. Olson et al.   WILDLIFE RESEARCH

Rapid Invasive Species Detection by Combining Environmental DNA with Light Transmission Spectroscopy

(2013) Scott P. Egan et al.   Conservation Letters

Site occupancy models in the analysis of environmental DNA presence/absence surveys: a case study of an emerging amphibian pathogen

(2013) Benedikt R. Schmidt et al.   Methods in Ecology and Evolution

Environmental DNA as a new method for early detection of New Zealand mudsnails (Potamopyrgus antipodarum)

(2013) Caren S. Goldberg et al.   Freshwater Science

Improved detection of an alien invasive species through environmental DNA barcoding: the example of the American bullfrogLithobates catesbeianus

(2012) Tony Dejean et al.   JOURNAL OF APPLIED ECOLOGY

Effectiveness of qPCR permutations, internal controls and dilution as means for minimizing the impact of inhibition while measuring Enterococcus in environmental waters

(2012) Y. Cao et al.   JOURNAL OF APPLIED MICROBIOLOGY

Conservation in a cup of water: estimating biodiversity and population abundance from environmental DNA

(2012) DAVID M. LODGE et al.   MOLECULAR ECOLOGY

Environmental DNA

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Browsed twig environmental DNA: diagnostic PCR to identify ungulate species

(2012) RUTH V. NICHOLS et al.   Molecular Ecology Resources

Using Boat Electrofishing to Estimate the Abundance of Invasive Common Carp in Small Midwestern Lakes

(2012) Przemyslaw G. Bajer et al.   NORTH AMERICAN JOURNAL OF FISHERIES MANAGEMENT

Estimation of Fish Biomass Using Environmental DNA

(2012) Teruhiko Takahara et al.   PLoS One

Molecular quantification of environmental DNA using microfluidics and digital PCR

(2012) Tatsuhiko Hoshino et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Sensitive detection of sample interference in environmental qPCR

(2012) Hyatt C. Green et al.   WATER RESEARCH

Comparison of commercial DNA extraction kits for isolation and purification of bacterial and eukaryotic DNA from PAH-contaminated soils

(2011) Nagissa Mahmoudi et al.   CANADIAN JOURNAL OF MICROBIOLOGY

From molecules to management: Adopting DNA-based methods for monitoring biological invasions in aquatic environments

(2011) John A. Darling et al.   ENVIRONMENTAL RESEARCH

Development of a real-time PCR assay for the detection of the invasive clam, Corbula amurensis, in environmental samples

(2011) Kirsty F. Smith et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Meta-barcoding of ‘dirt’ DNA from soil reflects vertebrate biodiversity

(2011) KENNETH ANDERSEN et al.   MOLECULAR ECOLOGY

Monitoring endangered freshwater biodiversity using environmental DNA

(2011) PHILIP FRANCIS THOMSEN et al.   MOLECULAR ECOLOGY

Molecular Detection of Vertebrates in Stream Water: A Demonstration Using Rocky Mountain Tailed Frogs and Idaho Giant Salamanders

(2011) Caren S. Goldberg et al.   PLoS One

“Sight-unseen” detection of rare aquatic species using environmental DNA

(2011) Christopher L. Jerde et al.   Conservation Letters

An evaluation of commercial DNA extraction kits for the isolation of bacterial spore DNA from soil

(2010) S.M. Dineen et al.   JOURNAL OF APPLIED MICROBIOLOGY

Species detection using environmental DNA from water samples

(2008) G. F. Ficetola et al.   Biology Letters