Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig
Authors
Keywords
-
Journal
Nature Communications
Volume 11, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-02-06
DOI
10.1038/s41467-020-14352-7
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Pan-cancer analysis of whole genomes
- (2020) NATURE
- The evolutionary history of 2,658 cancers
- (2020) Moritz Gerstung et al. NATURE
- The repertoire of mutational signatures in human cancer
- (2020) Ludmil B. Alexandrov et al. NATURE
- Inferring structural variant cancer cell fraction
- (2020) Marek Cmero et al. Nature Communications
- Passenger mutations can accelerate tumour suppressor gene inactivation in cancer evolution
- (2018) Dominik Wodarz et al. Journal of the Royal Society Interface
- Quantification of subclonal selection in cancer from bulk sequencing data
- (2018) Marc J. Williams et al. NATURE GENETICS
- Detecting repeated cancer evolution from multi-region tumor sequencing data
- (2018) Giulio Caravagna et al. NATURE METHODS
- Neutral tumor evolution?
- (2018) Maxime Tarabichi et al. NATURE GENETICS
- Between-region genetic divergence reflects the mode and tempo of tumor evolution
- (2017) Ruping Sun et al. NATURE GENETICS
- HRDetect is a predictor of BRCA1 and BRCA2 deficiency based on mutational signatures
- (2017) Helen Davies et al. NATURE MEDICINE
- Tracking the Evolution of Non–Small-Cell Lung Cancer
- (2017) Mariam Jamal-Hanjani et al. NEW ENGLAND JOURNAL OF MEDICINE
- Rapid evolution of the human mutation spectrum
- (2017) Kelley Harris et al. eLife
- Multiregion Whole-Exome Sequencing Uncovers the Genetic Evolution and Mutational Heterogeneity of Early-Stage Metastatic Melanoma
- (2016) K. Harbst et al. CANCER RESEARCH
- Landscape of somatic mutations in 560 breast cancer whole-genome sequences
- (2016) Serena Nik-Zainal et al. NATURE
- Divergent modes of clonal spread and intraperitoneal mixing in high-grade serous ovarian cancer
- (2016) Andrew McPherson et al. NATURE GENETICS
- Identification of neutral tumor evolution across cancer types
- (2016) Marc J Williams et al. NATURE GENETICS
- Assessing intratumor heterogeneity and tracking longitudinal and spatial clonal evolutionary history by next-generation sequencing
- (2016) Yuchao Jiang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mutational signatures associated with tobacco smoking in human cancer
- (2016) L. B. Alexandrov et al. SCIENCE
- Mutational signatures of ionizing radiation in second malignancies
- (2016) Sam Behjati et al. Nature Communications
- Clock-like mutational processes in human somatic cells
- (2015) Ludmil B Alexandrov et al. NATURE GENETICS
- A Big Bang model of human colorectal tumor growth
- (2015) Andrea Sottoriva et al. NATURE GENETICS
- Subclonal diversification of primary breast cancer revealed by multiregion sequencing
- (2015) Lucy R Yates et al. NATURE MEDICINE
- Extremely high genetic diversity in a single tumor points to prevalence of non-Darwinian cell evolution
- (2015) Shaoping Ling et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Simple Model-Based Approach to Inferring and Visualizing Cancer Mutation Signatures
- (2015) Yuichi Shiraishi et al. PLoS Genetics
- PhyloWGS: Reconstructing subclonal composition and evolution from whole-genome sequencing of tumors
- (2015) Amit G Deshwar et al. GENOME BIOLOGY
- Optimizing Cancer Genome Sequencing and Analysis
- (2015) Malachi Griffith et al. Cell Systems
- Genomic architecture and evolution of clear cell renal cell carcinomas defined by multiregion sequencing
- (2014) Marco Gerlinger et al. NATURE GENETICS
- PyClone: statistical inference of clonal population structure in cancer
- (2014) Andrew Roth et al. NATURE METHODS
- Intratumor heterogeneity in localized lung adenocarcinomas delineated by multiregion sequencing
- (2014) J. Zhang et al. SCIENCE
- Spatial and temporal diversity in genomic instability processes defines lung cancer evolution
- (2014) E. C. de Bruin et al. SCIENCE
- Signatures of mutational processes in human cancer
- (2013) Ludmil B. Alexandrov et al. NATURE
- Deciphering Signatures of Mutational Processes Operative in Human Cancer
- (2013) Ludmil B. Alexandrov et al. Cell Reports
- EMu: probabilistic inference of mutational processes and their localization in the cancer genome
- (2013) Andrej Fischer et al. GENOME BIOLOGY
- The Life History of 21 Breast Cancers
- (2012) Serena Nik-Zainal et al. CELL
- Optimal Detection of Changepoints With a Linear Computational Cost
- (2012) R. Killick et al. JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION
- Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing
- (2012) Marco Gerlinger et al. NEW ENGLAND JOURNAL OF MEDICINE
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search