Signaling pathways underlying nitrogen-dependent changes in root system architecture: from model to crop species

A Transcription Factor, OsMADS57, Regulates Long-distance Nitrate Transport and Root Elongation

(2019) Shuangjie Huang et al.   PLANT PHYSIOLOGY

Nitrate modulates the differentiation of root distal stem cells

(2019) Yalu Wang et al.   PLANT PHYSIOLOGY

Identification of molecular integrators shows that nitrogen actively controls the phosphate starvation response in plants

(2019) Anna Medici et al.   PLANT CELL

Natural variation of BSK3 tunes brassinosteroid signaling to regulate root foraging under low nitrogen

(2019) Zhongtao Jia et al.   Nature Communications

Genetic Dissection of Root System Architectural Traits in Spring Barley

(2019) Zhongtao Jia et al.   Frontiers in Plant Science

Interspecific competition among catch crops modifies vertical root biomass distribution and nitrate scavenging in soils

(2019) Diana Heuermann et al.   Scientific Reports

Responses to Systemic Nitrogen Signaling in Arabidopsis Roots Involvetrans-Zeatin in Shoots

(2018) Arthur Poitout et al.   PLANT CELL

Genetic Control of Root System Development in Maize

(2018) Frank Hochholdinger et al.   TRENDS IN PLANT SCIENCE

Author Correction: A mechanistic framework for auxin dependent Arabidopsis root hair elongation to low external phosphate

(2018) Rahul Bhosale et al.   Nature Communications

Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate

(2018) Jitender Giri et al.   Nature Communications

Functional Specificities of Brassinosteroid and Potential Utilization for Crop Improvement

(2018) Hongning Tong et al.   TRENDS IN PLANT SCIENCE

OsPIN1b is Involved in Rice Seminal Root Elongation by Regulating Root Apical Meristem Activity in Response to Low Nitrogen and Phosphate

(2018) Huwei Sun et al.   Scientific Reports

Local Auxin Biosynthesis Is a Key Regulator of Plant Development

(2018) Javier Brumos et al.   DEVELOPMENTAL CELL

Root zone–specific localization of AMTs determines ammonium transport pathways and nitrogen allocation to shoots

(2018) Fengying Duan et al.   PLOS BIOLOGY

Ammonium as a signal for physiological and morphological responses in plants

(2017) Ying Liu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Linear discriminant analysis reveals differences in root architecture in wheat seedlings related to nitrogen uptake efficiency

(2017) Kim Kenobi et al.   JOURNAL OF EXPERIMENTAL BOTANY

QTL analysis of the developmental response to L-glutamate in Arabidopsis roots and its genotype-by-environment interactions

(2017) Pia Walch-Liu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Discovery of nitrate–CPK–NLP signalling in central nutrient–growth networks

(2017) Kun-hsiang Liu et al.   NATURE

Changes in Gene Expression in Space and Time Orchestrate Environmentally Mediated Shaping of Root Architecture

(2017) Liam Walker et al.   PLANT CELL

Amino acid transporter mutants ofArabidopsisprovides evidence that a non-mycorrhizal plant acquires organic nitrogen from agricultural soil

(2017) Ulrika Ganeteg et al.   PLANT CELL AND ENVIRONMENT

Nitrate induction of root hair density is mediated by TGA1/TGA4 and CPC transcription factors in Arabidopsis thaliana

(2017) Javier Canales et al.   PLANT JOURNAL

The Auxin BiosyntheticTRYPTOPHAN AMINOTRANSFERASE RELATED TaTAR2.1-3AIncreases Grain Yield of Wheat

(2017) An Shao et al.   PLANT PHYSIOLOGY

Interacting TCP and NLP transcription factors control plant responses to nitrate availability

(2017) Peizhu Guan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Prioritizing quantitative trait loci for root system architecture in tetraploid wheat

(2016) Marco Maccaferri et al.   JOURNAL OF EXPERIMENTAL BOTANY

Environmental Nitrate Stimulates Abscisic Acid Accumulation in Arabidopsis Root Tips by Releasing It from Inactive Stores

(2016) Christine A. Ondzighi-Assoume et al.   PLANT CELL

Strigolactones are required for nitric oxide to induce root elongation in response to nitrogen and phosphate deficiencies in rice

(2016) Huwei Sun et al.   PLANT CELL AND ENVIRONMENT

Hormones and nitrate: a two-way connection

(2016) Gabriel Krouk   PLANT MOLECULAR BIOLOGY

CLE peptide signaling and nitrogen interactions in plant root development

(2016) Takao Araya et al.   PLANT MOLECULAR BIOLOGY

Root type specific reprogramming of maize pericycle transcriptomes by local high nitrate results in disparate lateral root branching patterns

(2016) Peng Yu et al.   PLANT PHYSIOLOGY

Root-type-specific plasticity in response to localized high nitrate supply in maize (Zea mays)

(2015) Peng Yu et al.   ANNALS OF BOTANY

Regulation of plant root system architecture: implications for crop advancement

(2015) Eric D Rogers et al.   CURRENT OPINION IN BIOTECHNOLOGY

Genetic diversity for root plasticity and nitrogen uptake in wheat seedlings

(2015) Vanessa J. Melino et al.   FUNCTIONAL PLANT BIOLOGY

Regulation of length and density of Arabidopsis root hairs by ammonium and nitrate

(2015) Thomas Vatter et al.   JOURNAL OF PLANT RESEARCH

Variation in NRT1.1B contributes to nitrate-use divergence between rice subspecies

(2015) Bin Hu et al.   NATURE GENETICS

Cell Type-Specific Gene Expression Analyses by RNA Sequencing Reveal Local High Nitrate-Triggered Lateral Root Initiation in Shoot-Borne Roots of Maize by Modulating Auxin-Related Cell Cycle Regulation

(2015) Peng Yu et al.   PLANT PHYSIOLOGY

Nitrate-Regulated Glutaredoxins Control Arabidopsis Primary Root Growth

(2015) Kurt Patterson et al.   PLANT PHYSIOLOGY

The Calcium Ion Is a Second Messenger in the Nitrate Signaling Pathway of Arabidopsis

(2015) Eleodoro Riveras et al.   PLANT PHYSIOLOGY

RNA Interference Knockdown of BRASSINOSTEROID INSENSITIVE1 in Maize Reveals Novel Functions for Brassinosteroid Signaling in Controlling Plant Architecture

(2015) Gokhan Kir et al.   PLANT PHYSIOLOGY

Nitrate sensing and uptake inArabidopsisare enhanced by ABI2, a phosphatase inactivated by the stress hormone abscisic acid

(2015) Sophie Léran et al.   Science Signaling

AtNIGT1/HRS1 integrates nitrate and phosphate signals at the Arabidopsis root tip

(2015) Anna Medici et al.   Nature Communications

Knockdown of the partner protein OsNAR2.1 for high-affinity nitrate transport represses lateral root formation in a nitrate-dependent manner

(2015) Shuangjie Huang et al.   Scientific Reports

Nitrate sensing and uptake inArabidopsisare enhanced by ABI2, a phosphatase inactivated by the stress hormone abscisic acid

(2015) Sophie Léran et al.   Science Signaling

Multiple mechanisms of nitrate sensing by Arabidopsis nitrate transceptor NRT1.1

(2015) E. Bouguyon et al.   Nature Plants

Nitrogen signalling pathways shaping root system architecture: an update

(2014) Brian G Forde   CURRENT OPINION IN PLANT BIOLOGY

Tryptophan-dependent auxin biosynthesis is required for HD-ZIP III-mediated xylem patterning

(2014) R. Ursache et al.   DEVELOPMENT

Ubiquitin ligase EL5 maintains the viability of root meristems by influencing cytokinin-mediated nitrogen effects in rice

(2014) Susumu Mochizuki et al.   JOURNAL OF EXPERIMENTAL BOTANY

Strigolactones are involved in phosphate- and nitrate-deficiency-induced root development and auxin transport in rice

(2014) Huwei Sun et al.   JOURNAL OF EXPERIMENTAL BOTANY

MADS-Box Transcription Factor AGL21 Regulates Lateral Root Development and Responds to Multiple External and Physiological Signals

(2014) Lin-Hui Yu et al.   Molecular Plant

A Receptor-Like Kinase Mediates Ammonium Homeostasis and Is Important for the Polar Growth of Root Hairs in Arabidopsis

(2014) L. Bai et al.   PLANT CELL

Analysis of the Root System Architecture of Arabidopsis Provides a Quantitative Readout of Crosstalk between Nutritional Signals

(2014) F. Kellermeier et al.   PLANT CELL

Heme-heme oxygenase 1 system is involved in ammonium tolerance by regulating antioxidant defence inOryza sativa

(2014) YANJIE XIE et al.   PLANT CELL AND ENVIRONMENT

A comprehensive analysis of root morphological changes and nitrogen allocation in maize in response to low nitrogen stress

(2014) KUN GAO et al.   PLANT CELL AND ENVIRONMENT

miR444a has multiple functions in the rice nitrate-signaling pathway

(2014) Yongsheng Yan et al.   PLANT JOURNAL

Systems approach identifies TGA1 and TGA4 transcription factors as important regulatory components of the nitrate response ofArabidopsis thalianaroots

(2014) José M. Alvarez et al.   PLANT JOURNAL

Auxin biosynthetic geneTAR2is involved in low nitrogen-mediated reprogramming of root architecture in Arabidopsis

(2014) Wenying Ma et al.   PLANT JOURNAL

Low Crown Root Number Enhances Nitrogen Acquisition from Low-Nitrogen Soils in Maize

(2014) P. Saengwilai et al.   PLANT PHYSIOLOGY

Induced Variations in Brassinosteroid Genes Define Barley Height and Sturdiness, and Expand the Green Revolution Genetic Toolkit

(2014) C. Dockter et al.   PLANT PHYSIOLOGY

Root Nutrient Foraging

(2014) R. F. H. Giehl et al.   PLANT PHYSIOLOGY

Arabidopsis ABCG14 is essential for the root-to-shoot translocation of cytokinin

(2014) D. Ko et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

CLE-CLAVATA1 peptide-receptor signaling module regulates the expansion of plant root systems in a nitrogen-dependent manner

(2014) Takao Araya et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nitrate foraging byArabidopsisroots is mediated by the transcription factor TCP20 through the systemic signaling pathway

(2014) Peizhu Guan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Perception of root-derived peptides by shoot LRR-RKs mediates systemic N-demand signaling

(2014) R. Tabata et al.   SCIENCE

Analysis of the expression of the AGL17-like clade of MADS-box transcription factors in rice

(2013) Jérôme Puig et al.   GENE EXPRESSION PATTERNS

It’s time to make changes: modulation of root system architecture by nutrient signals

(2013) Ricardo F. H. Giehl et al.   JOURNAL OF EXPERIMENTAL BOTANY

Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions

(2013) Yusaku Uga et al.   NATURE GENETICS

GSA-1/ARG1 protects root gravitropism inArabidopsisunder ammonium stress

(2013) Na Zou et al.   NEW PHYTOLOGIST

Characterization of AMT-Mediated High-Affinity Ammonium Uptake in Roots of Maize (Zea mays L.)

(2013) Riliang Gu et al.   PLANT AND CELL PHYSIOLOGY

Localized application of NH4 +-N plus P at the seedling and later growth stages enhances nutrient uptake and maize yield by inducing lateral root proliferation

(2013) Qinghua Ma et al.   PLANT AND SOIL

Auxin-mediated nitrate signalling by NRT1.1 participates in the adaptive response ofArabidopsisroot architecture to the spatial heterogeneity of nitrate availability

(2013) EMMANUELLE MOUNIER et al.   PLANT CELL AND ENVIRONMENT

Glutamate signalling via a MEKK1 kinase-dependent pathway induces changes in Arabidopsis root architecture

(2013) Brian G. Forde et al.   PLANT JOURNAL

Plasticity of the Arabidopsis Root System under Nutrient Deficiencies

(2013) B. D. Gruber et al.   PLANT PHYSIOLOGY

Ammonium Inhibits Primary Root Growth by Reducing the Length of Meristem and Elongation Zone and Decreasing Elemental Expansion Rate in the Root Apex in Arabidopsis thaliana

(2013) Ying Liu et al.   PLoS One

Integration of responses within and across Arabidopsis natural accessions uncovers loci controlling root systems architecture

(2013) U. Rosas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Systems approaches map regulatory networks downstream of the auxin receptor AFB3 in the nitrate response of Arabidopsis thaliana roots

(2013) E. A. Vidal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The interaction between OsMADS57 and OsTB1 modulates rice tillering via DWARF14

(2013) Siyi Guo et al.   Nature Communications

Maize root growth angles become steeper under low N conditions

(2012) S. Trachsel et al.   FIELD CROPS RESEARCH

Ammonium-induced loss of root gravitropism is related to auxin distribution and TRH1 function, and is uncoupled from the inhibition of root elongation in Arabidopsis

(2012) Na Zou et al.   JOURNAL OF EXPERIMENTAL BOTANY

Indeterminate domain 10regulates ammonium-mediated gene expression in rice roots

(2012) Yuan Hu Xuan et al.   NEW PHYTOLOGIST

Integration of Nitrogen and Potassium Signaling

(2011) Yi-Fang Tsay et al.   Annual Review of Plant Biology

Hormonal control of nitrogen acquisition: roles of auxin, abscisic acid, and cytokinin

(2011) Takatoshi Kiba et al.   JOURNAL OF EXPERIMENTAL BOTANY

Auxin Biosynthesis: A Simple Two-Step Pathway Converts Tryptophan to Indole-3-Acetic Acid in Plants

(2011) Yunde Zhao   Molecular Plant

Nitrogen economics of root foraging: Transitive closure of the nitrate-cytokinin relay and distinct systemic signaling for N supply vs. demand

(2011) S. Ruffel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Language of Calcium Signaling

(2010) Antony N. Dodd et al.   Annual Review of Plant Biology

Transcriptional Regulation of ROS Controls Transition from Proliferation to Differentiation in the Root

(2010) Hironaka Tsukagoshi et al.   CELL

Nitrate-Regulated Auxin Transport by NRT1.1 Defines a Mechanism for Nutrient Sensing in Plants

(2010) Gabriel Krouk et al.   DEVELOPMENTAL CELL

Ammonium Triggers Lateral Root Branching in Arabidopsis in an AMMONIUM TRANSPORTER1;3-Dependent Manner

(2010) J. E. Lima et al.   PLANT CELL

Nitrogen source interacts with ROP signalling in root hair tip-growth

(2010) DARIA BLOCH et al.   PLANT CELL AND ENVIRONMENT

Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana

(2010) E. A. Vidal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Soil amino-acid availability across a temperate-forest fertility gradient

(2009) David E. Rothstein   BIOGEOCHEMISTRY

A mutation in GDP-mannose pyrophosphorylase causes conditional hypersensitivity to ammonium, resulting in Arabidopsis root growth inhibition, altered ammonium metabolism, and hormone homeostasis

(2009) Carina Barth et al.   JOURNAL OF EXPERIMENTAL BOTANY

Ethylene is involved in nitrate-dependent root growth and branching in Arabidopsis thaliana

(2009) Qiu-Ying Tian et al.   NEW PHYTOLOGIST

Nitrate signalling mediated by the NRT1.1 nitrate transporter antagonises l-glutamate-induced changes in root architecture

(2008) Pia Walch-Liu et al.   PLANT JOURNAL

AtPTR1 and AtPTR5 Transport Dipeptides in Planta

(2008) N. Y. Komarova et al.   PLANT PHYSIOLOGY

GDP-mannose pyrophosphorylase is a genetic determinant of ammonium sensitivity in Arabidopsis thaliana

(2008) C. Qin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cell-specific nitrogen responses mediate developmental plasticity

(2008) M. L. Gifford et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Inhibition of maize root growth by high nitrate supply is correlated with reduced IAA levels in roots

(2007) Qiuying Tian et al.   JOURNAL OF PLANT PHYSIOLOGY