Discovery of nitrate–CPK–NLP signalling in central nutrient–growth networks

Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape

(2016) Ronan C. O’Malley et al.   CELL

Know where your clients are: subcellular localization and targets of calcium-dependent protein kinases

(2016) Andrea Simeunovic et al.   JOURNAL OF EXPERIMENTAL BOTANY

Plant Nitrogen Acquisition Under Low Availability: Regulation of Uptake and Root Architecture

(2016) Takatoshi Kiba et al.   PLANT AND CELL PHYSIOLOGY

Nuclear-localized cyclic nucleotide-gated channels mediate symbiotic calcium oscillations

(2016) M. Charpentier et al.   SCIENCE

Transcriptional networks in the nitrate response of Arabidopsis thaliana

(2015) Elena A Vidal et al.   CURRENT OPINION IN PLANT BIOLOGY

Nutrient-sensing mechanisms and pathways

(2015) Alejo Efeyan et al.   NATURE

SLC38A9 is a component of the lysosomal amino acid sensing machinery that controls mTORC1

(2015) Manuele Rebsamen et al.   NATURE

Cross-Species Network Analysis Uncovers Conserved Nitrogen-Regulated Network Modules in Rice

(2015) Mariana Obertello et al.   PLANT PHYSIOLOGY

The Calcium Ion Is a Second Messenger in the Nitrate Signaling Pathway of Arabidopsis

(2015) Eleodoro Riveras et al.   PLANT PHYSIOLOGY

Nitrate sensing and uptake inArabidopsisare enhanced by ABI2, a phosphatase inactivated by the stress hormone abscisic acid

(2015) Sophie Léran et al.   Science Signaling

AtNIGT1/HRS1 integrates nitrate and phosphate signals at the Arabidopsis root tip

(2015) Anna Medici et al.   Nature Communications

Nitrate sensing and uptake inArabidopsisare enhanced by ABI2, a phosphatase inactivated by the stress hormone abscisic acid

(2015) Sophie Léran et al.   Science Signaling

Multiple mechanisms of nitrate sensing by Arabidopsis nitrate transceptor NRT1.1

(2015) E. Bouguyon et al.   Nature Plants

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Emergence of a new step towards understanding the molecular mechanisms underlying nitrate-regulated gene expression

(2014) Mineko Konishi et al.   JOURNAL OF EXPERIMENTAL BOTANY

Master regulators in plant glucose signaling networks

(2014) Jen Sheen   JOURNAL OF PLANT BIOLOGY

OSCA1 mediates osmotic-stress-evoked Ca2+ increases vital for osmosensing in Arabidopsis

(2014) Fang Yuan et al.   NATURE

NODULE INCEPTION Antagonistically Regulates Gene Expression with Nitrate in Lotus japonicus

(2014) Takashi Soyano et al.   PLANT AND CELL PHYSIOLOGY

Systems approach identifies TGA1 and TGA4 transcription factors as important regulatory components of the nitrate response ofArabidopsis thalianaroots

(2014) José M. Alvarez et al.   PLANT JOURNAL

Nitrate foraging byArabidopsisroots is mediated by the transcription factor TCP20 through the systemic signaling pathway

(2014) Peizhu Guan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure-Guided Inhibitor Design Expands the Scope of Analog-Sensitive Kinase Technology

(2013) Chao Zhang et al.   ACS Chemical Biology

Side-Chain Modification of Cytokinins Controls Shoot Growth in Arabidopsis

(2013) Takatoshi Kiba et al.   DEVELOPMENTAL CELL

It’s time to make changes: modulation of root system architecture by nutrient signals

(2013) Ricardo F. H. Giehl et al.   JOURNAL OF EXPERIMENTAL BOTANY

Glutamate signalling in roots

(2013) Brian G. Forde   JOURNAL OF EXPERIMENTAL BOTANY

Glucose–TOR signalling reprograms the transcriptome and activates meristems

(2013) Yan Xiong et al.   NATURE

Ultrasensitive fluorescent proteins for imaging neuronal activity

(2013) Tsai-Wen Chen et al.   NATURE

Activity-dependent neuronal signalling and autism spectrum disorder

(2013) Daniel H. Ebert et al.   NATURE

RNA-Seq: revelation of the messengers

(2013) Marcel C. Van Verk et al.   TRENDS IN PLANT SCIENCE

Arabidopsis NIN-like transcription factors have a central role in nitrate signalling

(2013) Mineko Konishi et al.   Nature Communications

Nuclear retention of the transcription factor NLP7 orchestrates the early response to nitrate in plants

(2013) Chloé Marchive et al.   Nature Communications

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Systematic Analysis of Protein Phosphorylation Networks From Phosphoproteomic Data

(2012) Chunxia Song et al.   MOLECULAR & CELLULAR PROTEOMICS

Overexpressing the ANR1 MADS-Box Gene in Transgenic Plants Provides New Insights into its Role in the Nitrate Regulation of Root Development

(2012) Yinbo Gan et al.   PLANT AND CELL PHYSIOLOGY

Targeted parallel sequencing of large genetically-defined genomic regions for identifying mutations in Arabidopsis

(2012) Kun-hsiang Liu et al.   Plant Methods

CDPKs in immune and stress signaling

(2012) Marie Boudsocq et al.   TRENDS IN PLANT SCIENCE

Coping with Stresses: Roles of Calcium- and Calcium/Calmodulin-Regulated Gene Expression

(2011) Anireddy S.N. Reddy et al.   PLANT CELL

Calcium-Dependent Protein Kinases from Arabidopsis Show Substrate Specificity Differences in an Analysis of 103 Substrates

(2011) Amy Curran et al.   Frontiers in Plant Science

Predictive network modeling of the high-resolution dynamic plant transcriptome in response to nitrate

(2011) Gabriel Krouk et al.   GENOME BIOLOGY

Characterization of plant eukaryotic translation initiation factor 6 (eIF6) genes: The essential role in embryogenesis and their differential expression in Arabidopsis and rice

(2010) Yuki Kato et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Metabolic and Signaling Aspects Underpinning the Regulation of Plant Carbon Nitrogen Interactions

(2010) Adriano Nunes-Nesi et al.   Molecular Plant

Differential innate immune signalling via Ca2+ sensor protein kinases

(2010) Marie Boudsocq et al.   NATURE

Involvement of Arabidopsis RACK1 in Protein Translation and Its Regulation by Abscisic Acid

(2010) J. Guo et al.   PLANT PHYSIOLOGY

CHL1 Functions as a Nitrate Sensor in Plants

(2009) Cheng-Hsun Ho et al.   CELL

Application of Rice Nuclear Proteome Analysis to the Identification of Evolutionarily Conserved and Glucose-Responsive Nuclear Proteins

(2009) Toshihiko Aki et al.   JOURNAL OF PROTEOME RESEARCH

A Genetic Screen for Nitrate Regulatory Mutants Captures the Nitrate Transporter Gene NRT1.1

(2009) R. Wang et al.   PLANT PHYSIOLOGY

Nano Scale Proteomics Revealed the Presence of Regulatory Proteins Including Three FT-Like proteins in Phloem and Xylem Saps from Rice

(2008) Toshihiko Aki et al.   PLANT AND CELL PHYSIOLOGY

The nodule inception-like protein 7 modulates nitrate sensing and metabolism in Arabidopsis

(2008) Loren Castaings et al.   PLANT JOURNAL

AtCIPK8, a CBL-interacting protein kinase, regulates the low-affinity phase of the primary nitrate response

(2008) Heng-Cheng Hu et al.   PLANT JOURNAL