Subchromosome-Scale Nuclear and Complete Mitochondrial Genome Characteristics of Morchella crassipes

The mitochondrial genome of Morchella importuna (272.2 kb) is the largest among fungi and contains numerous introns, mitochondrial non-conserved open reading frames and repetitive sequences

(2019) Wei Liu et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Involvement of autophagy and apoptosis and lipid accumulation in sclerotial morphogenesis of Morchella importuna

(2018) Peixin He et al.   MICRON

Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata

(2018) Brenda D. Wingfield et al.   IMA Fungus

Opposite Polarity Monospore Genome De Novo Sequencing and Comparative Analysis Reveal the Possible Heterothallic Life Cycle of Morchella importuna

(2018) Wei Liu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Validation of Internal Control Genes for Quantitative Real-Time PCR Gene Expression Analysis in Morchella

(2018) Qianqian Zhang et al.   MOLECULES

Live cell confocal laser imaging studies on the nuclear behavior during meiosis and ascosporogenesis in Morchella importuna under artificial cultivation

(2017) Peixin He et al.   MICRON

Characterization of mating-type idiomorphs suggests that Morchella importuna, Mel-20 and M. sextelata are heterothallic

(2017) Hongmei Chai et al.   MYCOLOGICAL PROGRESS

Mixed-reproductive strategies, competitive mating-type distribution and life cycle of fourteen black morel species

(2017) Xi-Hui Du et al.   Scientific Reports

Isotopic evidence indicates saprotrophy in post-fire Morchella in Oregon and Alaska

(2016) Erik A. Hobbie et al.   MYCOLOGIA

Mitochondrial Dynamics and Metabolic Regulation

(2016) Timothy Wai et al.   TRENDS IN ENDOCRINOLOGY AND METABOLISM

DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies

(2016) Chengxi Ye et al.   Scientific Reports

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Morphological and ultrastructural examination of senescence in Morchella elata

(2015) Peixin He et al.   MICRON

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Complete mitochondrial genome of the medicinal fungus Ophiocordyceps sinensis

(2015) Yi Li et al.   Scientific Reports

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Mobile elements and mitochondrial genome expansion in the soil fungus and potato pathogenRhizoctonia solaniAG-3

(2014) Liliana Losada et al.   FEMS MICROBIOLOGY LETTERS

Mitochondrial Genome of Phlebia radiata Is the Second Largest (156 kbp) among Fungi and Features Signs of Genome Flexibility and Recent Recombination Events

(2014) Heikki Salavirta et al.   PLoS One

The 203 kbp Mitochondrial Genome of the Phytopathogenic Fungus Sclerotinia borealis Reveals Multiple Invasions of Introns and Genomic Duplications

(2014) Andrey V. Mardanov et al.   PLoS One

Comparative evaluation of antimutagenic and antimitotic effects ofMorchella esculentaextracts and protocatechuic acid

(2014) Dejan S. Stojković et al.   Frontiers in Life Science

OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets

(2013) Marc Lohse et al.   NUCLEIC ACIDS RESEARCH

Production, characterization and antioxidant activity of exopolysaccharides from submerged culture of Morchella crassipes

(2012) Peixin He et al.   BIOPROCESS AND BIOSYSTEMS ENGINEERING

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

(2012) Yanbin Yin et al.   NUCLEIC ACIDS RESEARCH

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

(2012) Ruibang Luo et al.   GigaScience

ProtTest 3: fast selection of best-fit models of protein evolution

(2011) Diego Darriba et al.   BIOINFORMATICS

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Scaffolding pre-assembled contigs using SSPACE

(2010) Marten Boetzer et al.   BIOINFORMATICS

Phylogeny and historical biogeography of true morels (Morchella) reveals an early Cretaceous origin and high continental endemism and provincialism in the Holarctic

(2010) Kerry O’Donnell et al.   FUNGAL GENETICS AND BIOLOGY

Kalapuya brunnea gen. & sp. nov. and its relationship to the other sequestrate genera in Morchellaceae

(2010) Matthew J. Trappe et al.   MYCOLOGIA

Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis

(2010) Francis Martin et al.   NATURE

ALLPATHS: De novo assembly of whole-genome shotgun microreads

(2008) J. Butler et al.   GENOME RESEARCH

A genetic linkage map for the ectomycorrhizal fungusLaccaria bicolorand its alignment to the whole-genome sequence assemblies

(2008) J. Labbé et al.   NEW PHYTOLOGIST

Telomeres and Aging

(2008) Geraldine Aubert et al.   PHYSIOLOGICAL REVIEWS