Evaluation of genetic diversity, agronomic traits, and anthracnose resistance in the NPGS Sudan Sorghum Core collection

GWAS analysis of sorghum association panel lines identifies SNPs associated with disease response to Texas isolates of Colletotrichum sublineola

(2019) Louis K. Prom et al.   THEORETICAL AND APPLIED GENETICS

Genomic signatures of adaptation to Sahelian and Soudanian climates in sorghum landraces of Senegal

(2019) Jacques M. Faye et al.   Ecology and Evolution

Strigolactone promotes cytokinin degradation through transcriptional activation ofCYTOKININ OXIDASE/DEHYDROGENASE 9in rice

(2019) Jingbo Duan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Population genomics of sorghum (Sorghum bicolor) across diverse agroclimatic zones of Niger

(2018) Fanna Maina et al.   GENOME

Population structure of the NPGS Senegalese sorghum collection and its evaluation to identify new disease resistant genes

(2018) Hugo E. Cuevas et al.   PLoS One

Genome-Wide Association Mapping of Anthracnose ( ) Resistance in the U.S. Sorghum Association Panel

(2018) Hugo E. Cuevas et al.   Plant Genome

Association mapping by aerial drone reveals 213 genetic associations for Sorghum bicolor biomass traits under drought

(2018) Jennifer E. Spindel et al.   BMC GENOMICS

Sorghum Dw2 Encodes a Protein Kinase Regulator of Stem Internode Length

(2017) Josie L. Hilley et al.   Scientific Reports

A Genomic Resource for the Development, Improvement, and Exploitation of Sorghum for Bioenergy

(2016) Zachary W. Brenton et al.   GENETICS

Selection and explosive growth alter genetic architecture and hamper the detection of causal rare variants

(2016) Lawrence H. Uricchio et al.   GENOME RESEARCH

Registration of 40 Converted Germplasm Sources from the Reinstated Sorghum Conversion Program

(2016) R. R. Klein et al.   Journal of Plant Registrations

Genome-Wide Association Studies of Grain Yield Components in Diverse Sorghum Germplasm

(2016) Richard E. Boyles et al.   Plant Genome

Iterative Usage of Fixed and Random Effect Models for Powerful and Efficient Genome-Wide Association Studies

(2016) Xiaolei Liu et al.   PLoS Genetics

A Genomic Resource for the Development, Improvement, and Exploitation of Sorghum for Bioenergy

(2016) Zachary W. Brenton et al.   GENETICS

Sequencing of an Anthracnose-Resistant Sorghum Genotype and Mapping of a Major QTL Reveal Strong Candidate Genes for Anthracnose Resistance

(2015) A. Millie Burrell et al.   CROP SCIENCE

Genome-Wide Prediction and Validation of Intergenic Enhancers in Arabidopsis Using Open Chromatin Signatures

(2015) Bo Zhu et al.   PLANT CELL

Genome-environment associations in sorghum landraces predict adaptive traits

(2015) J. R. Lasky et al.   Science Advances

Genome-Wide Association Study of Grain Polyphenol Concentrations in Global Sorghum [Sorghum bicolor (L.) Moench] Germplasm

(2014) Davina H. Rhodes et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Inheritance and molecular mapping of anthracnose resistance genes present in sorghum line SC112-14

(2014) Hugo E. Cuevas et al.   MOLECULAR BREEDING

TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline

(2014) Jeffrey C. Glaubitz et al.   PLoS One

The USDA Barley Core Collection: Genetic Diversity, Population Structure, and Potential for Genome-Wide Association Studies

(2014) María Muñoz-Amatriaín et al.   PLoS One

Registration of Partially Converted Germplasm from 44 Accessions of the USDA-ARS Ethiopian and Sudanese Sorghum Collections

(2013) R. R. Klein et al.   Journal of Plant Registrations

Variation in inflorescence architecture associated with yield components in a sorghum germplasm

(2013) Khaing Pann Witt Hmon et al.   Plant Genetic Resources-Characterization and Utilization

GAPIT: genome association and prediction integrated tool

(2012) Alexander E. Lipka et al.   BIOINFORMATICS

Genetic diversity and pathotype determination of Colletotrichum sublineolum isolates causing anthracnose in sorghum

(2012) L. K. Prom et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Presence of tannins in sorghum grains is conditioned by different natural alleles of Tannin1

(2012) Y. Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Population genomic and genome-wide association studies of agroclimatic traits in sorghum

(2012) G. P. Morris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

(2011) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

ADZE: a rarefaction approach for counting alleles private to combinations of populations

(2008) Z. A. Szpiech et al.   BIOINFORMATICS

Status and Prospects of Association Mapping in Plants

(2008) Chengsong Zhu et al.   Plant Genome