Codon usage pattern and its influencing factors in different genomes of hepadnaviruses

Analysis of codon usage patterns and influencing factors in Nipah virus

(2019) Supriyo Chakraborty et al.   VIRUS RESEARCH

Recent progress in potential anti-hepatitis B virus agents: Structural and pharmacological perspectives

(2018) Dejuan Sun et al.   EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY

Codon usage pattern of complex III gene of respiratory chain among platyhelminths

(2018) Gulshana A. Mazumder et al.   INFECTION GENETICS AND EVOLUTION

Analysis of codon usage pattern of mitochondrial protein-coding genes in different hookworms

(2018) Bornali Deb et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

The analysis of genome composition and codon bias reveals distinctive patterns between avian and mammalian circoviruses which suggest a potential recombinant origin for Porcine circovirus 3

(2018) Giovanni Franzo et al.   PLoS One

Codon usage characteristics of PB2 gene in influenza A H7N9 virus from different host species

(2018) Li Gun et al.   INFECTION GENETICS AND EVOLUTION

Preference of A/T ending codons in mitochondrial ATP6 gene under phylum Platyhelminthes

(2018) Gulshana A Mazumder et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

DNA compositional dynamics and codon usage patterns of M1 and M2 matrix protein genes in influenza A virus

(2018) Himangshu Deka et al.   INFECTION GENETICS AND EVOLUTION

Codon usage trend in mitochondrial CYB gene

(2016) Arif Uddin et al.   GENE

Insights into the Usage of Nucleobase Triplets and Codon Context Pattern in Five Influenza A Virus Subtypes

(2016) Himangshu Deka et al.   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

Evolution of codon usage in Zika virus genomes is host and vector specific

(2016) Azeem Mehmood Butt et al.   Emerging Microbes & Infections

Revelation of Influencing Factors in Overall Codon Usage Bias of Equine Influenza Viruses

(2016) Naveen Kumar et al.   PLoS One

Codon Optimality Is a Major Determinant of mRNA Stability

(2015) Vladimir Presnyak et al.   CELL

Insect-Specific Flaviviruses: A Systematic Review of Their Discovery, Host Range, Mode of Transmission, Superinfection Exclusion Potential and Genomic Organization

(2015) Bradley Blitvich et al.   Viruses-Basel

Analysis of codon usage bias of mitochondrial genome in Bombyx moriand its relation to evolution

(2014) Lei Wei et al.   BMC EVOLUTIONARY BIOLOGY

Snow Goose Hepatitis B Virus (SGHBV) Envelope and Capsid Proteins Independently Contribute to the Ability of SGHBV To Package Capsids Containing Single-Stranded DNA in Virions

(2014) N. Greco et al.   JOURNAL OF VIROLOGY

Genome-Wide Analysis of Codon Usage and Influencing Factors in Chikungunya Viruses

(2014) Azeem Mehmood Butt et al.   PLoS One

Synonymous Codon Usage in TTSuV2: Analysis and Comparison with TTSuV1

(2013) Zhicheng Zhang et al.   PLoS One

Genome-Wide Patterns of Codon Bias Are Shaped by Natural Selection in the Purple Sea Urchin, Strongylocentrotus purpuratus

(2013) Kord M. Kober et al.   G3-Genes Genomes Genetics

Analysis of synonymous codon usage patterns in torque teno sus virus 1 (TTSuV1)

(2012) Zhicheng Zhang et al.   ARCHIVES OF VIROLOGY

Genetic characterization and codon usage bias of full-length Hepatitis E virus sequences shed new lights on genotypic distribution, host restriction and genome evolution

(2012) Jerome Bouquet et al.   INFECTION GENETICS AND EVOLUTION

The analysis of codon bias of foot-and-mouth disease virus and the adaptation of this virus to the hosts

(2012) Jian-hua Zhou et al.   INFECTION GENETICS AND EVOLUTION

Patterns and influencing factor of synonymous codon usage in porcine circovirus

(2012) Xin-sheng LIU et al.   Virology Journal

Strategies for subtypes—dealing with the diversity of breast cancer: highlights of the St Gallen International Expert Consensus on the Primary Therapy of Early Breast Cancer 2011

(2011) A. Goldhirsch et al.   ANNALS OF ONCOLOGY

Effect of Using Organic Acids to Substitute Antibiotic Growth Promoters on Performance and Intestinal Microflora of Broilers

(2011) H. M. A. Hassan et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

Analysis of codon usage and nucleotide composition bias in polioviruses

(2011) Jie Zhang et al.   Virology Journal

The characteristics of the synonymous codon usage in hepatitis B virus and the effects of host on the virus in codon usage pattern

(2011) Ming-ren Ma et al.   Virology Journal

Codon usage bias in herpesvirus

(2010) Minghui Fu   ARCHIVES OF VIROLOGY

Codon usage bias and the evolution of influenza A viruses. Codon Usage Biases of Influenza Virus

(2010) Emily HM Wong et al.   BMC EVOLUTIONARY BIOLOGY

Viral Mutation Rates

(2010) R. Sanjuan et al.   JOURNAL OF VIROLOGY

Interferons Accelerate Decay of Replication-Competent Nucleocapsids of Hepatitis B Virus

(2010) C. Xu et al.   JOURNAL OF VIROLOGY

Synonymous but not the same: the causes and consequences of codon bias

(2010) Joshua B. Plotkin et al.   NATURE REVIEWS GENETICS

A General Model of Codon Bias Due to GC Mutational Bias

(2010) Gareth A. Palidwor et al.   PLoS One

Categorizing Host-Dependent RNA Viruses by Principal Component Analysis of Their Codon Usage Preferences

(2009) Ming-Wei Su et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

An extensive analysis on the global codon usage pattern of baculoviruses

(2008) Yue Jiang et al.   ARCHIVES OF VIROLOGY

Analysis of synonymous codon usage in 11 Human Bocavirus isolates

(2008) Sheng Zhao et al.   BIOSYSTEMS

The global impact of vaccination against hepatitis B: A historical overview

(2008) Alessandro R. Zanetti et al.   VACCINE

Analysis of synonymous codon usage in classical swine fever virus

(2008) Pan Tao et al.   VIRUS GENES