Classification of foodborne bacteria using hyperspectral microscope imaging technology coupled with convolutional neural networks‡

A U-Net Deep Learning Framework for High Performance Vessel Segmentation in Patients With Cerebrovascular Disease

(2019) Michelle Livne et al.   Frontiers in Neuroscience

Application of Machine Learning in Microbiology

(2019) Kaiyang Qu et al.   Frontiers in Microbiology

Identifying non-O157 Shiga toxin-producing Escherichia coli (STEC) using deep learning methods with hyperspectral microscope images

(2019) Rui Kang et al.   SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY

Use of 2D U-Net Convolutional Neural Networks for Automated Cartilage and Meniscus Segmentation of Knee MR Imaging Data to Determine Relaxometry and Morphometry

(2018) Berk Norman et al.   RADIOLOGY

U-Net: deep learning for cell counting, detection, and morphometry

(2018) Thorsten Falk et al.   NATURE METHODS

Detection of Salmonella from chicken rinsate with visible/near-infrared hyperspectral microscope imaging compared against RT-PCR

(2018) Matthew Eady et al.   TALANTA

Differentiation of foodborne bacteria using NIR hyperspectral imaging and multivariate data analysis

(2016) Terri-Lee Kammies et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

MorphoLibJ: integrated library and plugins for mathematical morphology with ImageJ

(2016) David Legland et al.   BIOINFORMATICS

Commercially Available Rapid Methods for Detection of Selected Food-borne Pathogens

(2015) Wladir B. Valderrama et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Automatic Counting and Classification of Bacterial Colonies Using Hyperspectral Imaging

(2015) Seung-Chul Yoon et al.   Food and Bioprocess Technology

Label-free and non-invasive discrimination of HaCaT and melanoma cells in a co-culture model by hyperspectral confocal reflectance microscopy

(2015) Francesca R. Bertani et al.   Journal of Biophotonics

Deep learning

(2015) Yann LeCun et al.   NATURE

Hyperspectral Microscope Imaging Methods to Classify Gram-Positive and Gram-Negative Foodborne Pathogenic Bacteria

(2015)   Transactions of the ASABE

Rapid methods for the detection of foodborne bacterial pathogens: principles, applications, advantages and limitations

(2015) Jodi Woan-Fei Law et al.   Frontiers in Microbiology

Investigation of fungal development in maize kernels using NIR hyperspectral imaging and multivariate data analysis

(2012) Paul J. Williams et al.   JOURNAL OF CEREAL SCIENCE

Hyperspectral imaging microscopy for identification and quantitative analysis of fluorescently-labeled cells in highly autofluorescent tissue

(2011) Silas J. Leavesley et al.   Journal of Biophotonics

Diagnosis of Diabetic Retinopathy: Automatic Extraction of Optic Disc and Exudates from Retinal Images using Marker-controlled Watershed Transformation

(2010) Ahmed Wasif Reza et al.   JOURNAL OF MEDICAL SYSTEMS

Optimal multi-level thresholding using a two-stage Otsu optimization approach

(2008) Deng-Yuan Huang et al.   PATTERN RECOGNITION LETTERS