Genomic survey sequencing for development and validation of single-locus SSR markers in peanut (Arachis hypogaea L.)

Quantitative trait locus analysis of agronomic and quality-related traits in cultivated peanut (Arachis hypogaea L.)

(2015) Li Huang et al.   THEORETICAL AND APPLIED GENETICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Construction of a SNP-based genetic linkage map in cultivated peanut based on large scale marker development using next-generation double-digest restriction-site-associated DNA sequencing (ddRADseq)

(2014) Xiaojing Zhou et al.   BMC GENOMICS

Analysis of simple sequence repeats in the Gaeumannomyces graminis var. tritici genome and the development of microsatellite markers

(2014) Wei Li et al.   CURRENT GENETICS

De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits

(2014) Ying-hui Li et al.   NATURE BIOTECHNOLOGY

Improving mammalian genome scaffolding using large insert mate-pair next-generation sequencing

(2013) Sebastiaan van Heesch et al.   BMC GENOMICS

Genome-Wide Microsatellite Characterization and Marker Development in the Sequenced Brassica Crop Species

(2013) J. Shi et al.   DNA RESEARCH

Development of SSR markers by next-generation sequencing of Korean landraces of chamoe (Cucumis melo var. makuwa)

(2013) Inkyu Park et al.   MOLECULAR BIOLOGY REPORTS

Genome Survey Sequencing and Genetic Background Characterization of Gracilariopsis lemaneiformis (Rhodophyta) Based on Next-Generation Sequencing

(2013) Wei Zhou et al.   PLoS One

Global Transcriptome Sequencing Using the Illumina Platform and the Development of EST-SSR Markers in Autotetraploid Alfalfa

(2013) Zhipeng Liu et al.   PLoS One

A study of the relationships of cultivated peanut (Arachis hypogaea) and its most closely related wild species using intron sequences and microsatellite markers

(2012) Márcio C. Moretzsohn et al.   ANNALS OF BOTANY

Development and validation of genic-SSR markers in sesame by RNA-seq

(2012) Haiyang Zhang et al.   BMC GENOMICS

De novo assembly and Characterisation of the Transcriptome during seed development, and generation of genic-SSR markers in Peanut (Arachis hypogaea L.)

(2012) Jianan Zhang et al.   BMC GENOMICS

A high-density genetic map of Arachis duranensis, a diploid ancestor of cultivated peanut

(2012) Ervin D Nagy et al.   BMC GENOMICS

In silico polymorphism analysis for the development of simple sequence repeat and transposon markers and construction of linkage map in cultivated peanut

(2012) Kenta Shirasawa et al.   BMC PLANT BIOLOGY

Primer3—new capabilities and interfaces

(2012) Andreas Untergasser et al.   NUCLEIC ACIDS RESEARCH

An International Reference Consensus Genetic Map with 897 Marker Loci Based on 11 Mapping Populations for Tetraploid Groundnut (Arachis hypogaea L.)

(2012) Bhimana Gautami et al.   PLoS One

Development of a core set of single-locus SSR markers for allotetraploid rapeseed (Brassica napus L.)

(2012) Haitao Li et al.   THEORETICAL AND APPLIED GENETICS

Advances in Arachis genomics for peanut improvement

(2011) Manish K. Pandey et al.   BIOTECHNOLOGY ADVANCES

Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae

(2011) Pablo F Cavagnaro et al.   BMC GENOMICS

Large-scale development of expressed sequence tag-derived simple sequence repeat markers and diversity analysis in Arachis spp.

(2011) Padmalatha Koilkonda et al.   MOLECULAR BREEDING

Highly informative genic and genomic SSR markers to facilitate molecular breeding in cultivated groundnut (Arachis hypogaea)

(2011) Manish K. Pandey et al.   PLANT BREEDING

Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.)

(2010) Pablo F Cavagnaro et al.   BMC GENOMICS

Genome-wide patterns of genetic variation among elite maize inbred lines

(2010) Jinsheng Lai et al.   NATURE GENETICS

Genetic diversity in domesticated soybean (Glycine max) and its wild progenitor (Glycine soja) for simple sequence repeat and single-nucleotide polymorphism loci

(2010) Ying-Hui Li et al.   NEW PHYTOLOGIST

Genetic diversity and population structure of a diverse set of rice germplasm for association mapping

(2010) Liang Jin et al.   THEORETICAL AND APPLIED GENETICS

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

SOAP: short oligonucleotide alignment program

(2008) R. Li et al.   BIOINFORMATICS

Isolation and characterization of novel microsatellite markers and their application for diversity assessment in cultivated groundnut (Arachis hypogaea)

(2008) Luu M Cuc et al.   BMC PLANT BIOLOGY

A set of microsatellite markers with long core repeat optimized for grape (Vitis spp.) genotyping

(2008) Guido Cipriani et al.   BMC PLANT BIOLOGY

Divergent patterns of allelic diversity from similar origins: the case of oilseed rape (Brassica napus L.) in China and Australia

(2008) S. Chen et al.   GENOME

The impact of next-generation sequencing technology on genetics

(2008) Elaine R. Mardis   TRENDS IN GENETICS