Genomic profiling of exogenous abscisic acid-responsive microRNAs in tomato (Solanum lycopersicum)

Grapevine microRNAs responsive to exogenous gibberellin

(2014) Jian Han et al.   BMC GENOMICS

Comparative transcriptome analysis of tomato (Solanum lycopersicum) in response to exogenous abscisic acid

(2013) Yan Wang et al.   BMC GENOMICS

Advances in the Techniques for the Prediction of microRNA Targets

(2013) Hao Zheng et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Arabidopsis Non-Coding RNA Regulation in Abiotic Stress Responses

(2013) Akihiro Matsui et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Characterization and expression profiling of selected microRNAs in tomato (Solanum lycopersicon) ‘Jiangshu14’

(2013) Nicholas Kibet Korir et al.   MOLECULAR BIOLOGY REPORTS

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

MYB transcription factor genes as regulators for plant responses: an overview

(2013) Supriya Ambawat et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

Small RNA profiling of virus-infected grapevines: evidences for virus infection-associated and variety-specific miRNAs

(2012) Kashmir Singh et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Genome-wide identification and expression analysis of heat-responsive and novel microRNAs in Populus tomentosa

(2012) Lei Chen et al.   GENE

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

Non-coding RNAs in the plant response to abiotic stress

(2012) Cecilia Contreras-Cubas et al.   PLANTA

Plant–pathogen interactions: disease resistance in modern agriculture

(2012) Lesley A. Boyd et al.   TRENDS IN GENETICS

Functions of microRNAs in plant stress responses

(2012) Ramanjulu Sunkar et al.   TRENDS IN PLANT SCIENCE

NAC transcription factors in plant abiotic stress responses

(2011) Kazuo Nakashima et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Identification and characterization of maize microRNAs involved in the very early stage of seed germination

(2011) Liwen Wang et al.   BMC GENOMICS

In silico identification and characterization of microRNAs and their putative target genes in Solanaceae plants

(2011) Hyun-Jin Kim et al.   GENOME

ABA-mediated transcriptional regulation in response to osmotic stress in plants

(2011) Yasunari Fujita et al.   JOURNAL OF PLANT RESEARCH

Deep sequencing of grapevine flower and berry short RNA library for discovery of novel microRNAs and validation of precise sequences of grapevine microRNAs deposited in miRBase

(2011) Chen Wang et al.   PHYSIOLOGIA PLANTARUM

TheArabidopsisbHLH Transcription Factors MYC3 and MYC4 Are Targets of JAZ Repressors and Act Additively with MYC2 in the Activation of Jasmonate Responses

(2011) Patricia Fernández-Calvo et al.   PLANT CELL

The Emerging Importance of Type I MADS Box Transcription Factors for Plant Reproduction

(2011) S. Masiero et al.   PLANT CELL

Plant tolerance to drought and salinity: stress regulating transcription factors and their functional significance in the cellular transcriptional network

(2011) Dortje Golldack et al.   PLANT CELL REPORTS

Abscisic acid enhances resistance to Alternaria solani in tomato seedlings

(2011) Weiwei Song et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

MicroRNAs in tomato plants

(2011) JinHua Zuo et al.   Science China-Life Sciences

Abscisic Acid: Emergence of a Core Signaling Network

(2010) Sean R. Cutler et al.   Annual Review of Plant Biology

Computational analysis of miRNA targets in plants: current status and challenges

(2010) X. Dai et al.   BRIEFINGS IN BIOINFORMATICS

Efficient Silencing of Endogenous MicroRNAs Using Artificial MicroRNAs in Arabidopsis thaliana

(2010) Andrew L. Eamens et al.   Molecular Plant

Molecular Basis of the Core Regulatory Network in ABA Responses: Sensing, Signaling and Transport

(2010) T. Umezawa et al.   PLANT AND CELL PHYSIOLOGY

MicroRNA Gene Evolution inArabidopsis lyrataandArabidopsis thaliana

(2010) Noah Fahlgren et al.   PLANT CELL

An Atlas of Type I MADS Box Gene Expression during Female Gametophyte and Seed Development in Arabidopsis

(2010) Marian Bemer et al.   PLANT PHYSIOLOGY

Comparative Analyses of Plant Transcription Factor Databases

(2009) Silvia Ramirez et al.   CURRENT GENOMICS

Expression analysis of phytohormone-regulated microRNAs in rice, implying their regulation roles in plant hormone signaling

(2009) Qing Liu et al.   FEBS LETTERS

SQUAMOSA Promoter Binding Protein-Like7 Is a Central Regulator for Copper Homeostasis in Arabidopsis

(2009) H. Yamasaki et al.   PLANT CELL

The MYB23 Gene Provides a Positive Feedback Loop for Cell Fate Specification in the Arabidopsis Root Epidermis

(2009) Y. H. Kang et al.   PLANT CELL

The multifaceted role of ABA in disease resistance

(2009) Jurriaan Ton et al.   TRENDS IN PLANT SCIENCE

SOAP: short oligonucleotide alignment program

(2008) R. Li et al.   BIOINFORMATICS

Identification of conserved microRNAs and their target genes in tomato (Lycopersicon esculentum)

(2008) Zujun Yin et al.   GENE

Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening

(2008) S. Moxon et al.   GENOME RESEARCH

Plant Receptor-Like Serine Threonine Kinases: Roles in Signaling and Plant Defense

(2008) Ahmed J. Afzal et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms

(2008) Peter A. C. 't Hoen et al.   NUCLEIC ACIDS RESEARCH

MYB72, a node of convergence in induced systemic resistance triggered by a fungal and a bacterial beneficial microbe

(2008) G. Segarra et al.   PLANT BIOLOGY

The Arabidopsis NFYA5 Transcription Factor Is Regulated Transcriptionally and Posttranscriptionally to Promote Drought Resistance

(2008) W.-X. Li et al.   PLANT CELL

Criteria for Annotation of Plant MicroRNAs

(2008) B. C. Meyers et al.   PLANT CELL

Sulphur starvation induces the expression of microRNA-395 and one of its target genes but in different cell types

(2008) Cintia Goulart Kawashima et al.   PLANT JOURNAL

Characterization of the ABA-regulated global responses to dehydration in Arabidopsis by metabolomics

(2008) Kaoru Urano et al.   PLANT JOURNAL

Identification of microRNAs and other small regulatory RNAs using cDNA library sequencing

(2007) Markus Hafner et al.   METHODS