AnnoLnc: a web server for systematically annotating novel human lncRNAs
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
AnnoLnc: a web server for systematically annotating novel human lncRNAs
Authors
Keywords
Annotation, LncRNAs, Long noncoding RNAs, Transcriptome, Web server
Journal
BMC GENOMICS
Volume 17, Issue 1, Pages -
Publisher
Springer Nature
Online
2016-11-17
DOI
10.1186/s12864-016-3287-9
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Computational approaches towards understanding human long non-coding RNA biology
- (2015) Saakshi Jalali et al. BIOINFORMATICS
- The landscape of long noncoding RNAs in the human transcriptome
- (2015) Matthew K Iyer et al. NATURE GENETICS
- RPI-Pred: predicting ncRNA-protein interaction using sequence and structural information
- (2015) V. Suresh et al. NUCLEIC ACIDS RESEARCH
- The lncRNA H19 promotes epithelial to mesenchymal transition by functioning as miRNA sponges in colorectal cancer
- (2015) Wei-Cheng Liang et al. Oncotarget
- LongTarget: a tool to predict lncRNA DNA-binding motifs and binding sites via Hoogsteen base-pairing analysis
- (2014) Sha He et al. BIOINFORMATICS
- LncTar: a tool for predicting the RNA targets of long noncoding RNAs
- (2014) Jianwei Li et al. BRIEFINGS IN BIOINFORMATICS
- Genome-wide Mapping and Characterization of Notch-Regulated Long Noncoding RNAs in Acute Leukemia
- (2014) Thomas Trimarchi et al. CELL
- High expression of long non-coding RNA H19 is required for efficient tumorigenesis induced byBcr-Abloncogene
- (2014) Guijie Guo et al. FEBS LETTERS
- The H19 long noncoding RNA gives rise to microRNAs miR-675-3p and miR-675-5p to promote skeletal muscle differentiation and regeneration
- (2014) B. K. Dey et al. GENES & DEVELOPMENT
- miR-CLIP capture of a miRNA targetome uncovers a lincRNA H19–miR-106a interaction
- (2014) Jochen Imig et al. Nature Chemical Biology
- lncRNAdb v2.0: expanding the reference database for functional long noncoding RNAs
- (2014) Xiu Cheng Quek et al. NUCLEIC ACIDS RESEARCH
- Functional interactions among microRNAs and long noncoding RNAs
- (2014) Je-Hyun Yoon et al. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- PIPE-CLIP: a comprehensive online tool for CLIP-seq data analysis
- (2014) Beibei Chen et al. GENOME BIOLOGY
- Methods for comprehensive experimental identification of RNA-protein interactions
- (2014) Colleen A McHugh et al. GENOME BIOLOGY
- catRAPID omics: a web server for large-scale prediction of protein-RNA interactions
- (2013) F. Agostini et al. BIOINFORMATICS
- Systematically profiling and annotating long intergenic non-coding RNAs in human embryonic stem cell
- (2013) Xing Tang et al. BMC GENOMICS
- Computational prediction of associations between long non-coding RNAs and proteins
- (2013) Qiongshi Lu et al. BMC GENOMICS
- Long noncoding RNAs and the genetics of cancer
- (2013) S W Cheetham et al. BRITISH JOURNAL OF CANCER
- X-Inactivation, Imprinting, and Long Noncoding RNAs in Health and Disease
- (2013) Jeannie T. Lee et al. CELL
- Cell cycle regulation by long non-coding RNAs
- (2013) Masatoshi Kitagawa et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- CCAT2, a novel noncoding RNA mapping to 8q24, underlies metastatic progression and chromosomal instability in colon cancer
- (2013) H. Ling et al. GENOME RESEARCH
- Structure and function of long noncoding RNAs in epigenetic regulation
- (2013) Tim R Mercer et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Widespread purifying selection on RNA structure in mammals
- (2013) Martin A. Smith et al. NUCLEIC ACIDS RESEARCH
- The NHGRI GWAS Catalog, a curated resource of SNP-trait associations
- (2013) Danielle Welter et al. NUCLEIC ACIDS RESEARCH
- Assessing Computational Methods for Transcription Factor Target Gene Identification Based on ChIP-seq Data
- (2013) Weronika Sikora-Wohlfeld et al. PLoS Computational Biology
- Genome Regulation by Long Noncoding RNAs
- (2012) John L. Rinn et al. Annual Review of Biochemistry
- miRcode: a map of putative microRNA target sites in the long non-coding transcriptome
- (2012) Ashwini Jeggari et al. BIOINFORMATICS
- The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
- (2012) T. Derrien et al. GENOME RESEARCH
- GENCODE: The reference human genome annotation for The ENCODE Project
- (2012) J. Harrow et al. GENOME RESEARCH
- DGCR8 HITS-CLIP reveals novel functions for the Microprocessor
- (2012) Sara Macias et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Structural architecture of the human long non-coding RNA, steroid receptor RNA activator
- (2012) Irina V. Novikova et al. NUCLEIC ACIDS RESEARCH
- Long non-coding RNAs function annotation: a global prediction method based on bi-colored networks
- (2012) Xingli Guo et al. NUCLEIC ACIDS RESEARCH
- ViennaRNA Package 2.0
- (2011) Ronny Lorenz et al. Algorithms for Molecular Biology
- Human long non-coding RNAs promote pluripotency and neuronal differentiation by association with chromatin modifiers and transcription factors
- (2011) Shi-Yan Ng et al. EMBO JOURNAL
- Molecular Mechanisms of Long Noncoding RNAs
- (2011) Kevin C. Wang et al. MOLECULAR CELL
- RNA targets of wild-type and mutant FET family proteins
- (2011) Jessica I Hoell et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- ncFANs: a web server for functional annotation of long non-coding RNAs
- (2011) Q. Liao et al. NUCLEIC ACIDS RESEARCH
- Large-scale prediction of long non-coding RNA functions in a coding–non-coding gene co-expression network
- (2011) Qi Liao et al. NUCLEIC ACIDS RESEARCH
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
- (2009) Mitchell Guttman et al. NATURE
- Most mammalian mRNAs are conserved targets of microRNAs
- (2008) R. C. Friedman et al. GENOME RESEARCH
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started