From yeast to hypha: defining transcriptomic signatures of the morphological switch in the dimorphic fungal pathogen Ophiostoma novo-ulmi

Effect of linoleic acid on reproduction and yeast–mycelium dimorphism in the Dutch elm disease pathogens

(2016) Erika Sayuri Naruzawa et al.   Botany

Diversity in yeast–mycelium dimorphism response of the Dutch elm disease pathogens: the inoculum size effect

(2016) Marie-Ève Wedge et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Quorum-Sensing Mechanisms Mediated by Farnesol in Ophiostoma piceae: Effect on Secretion of Sterol Esterase

(2015) Felipe de Salas et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

RNAseq Analysis Highlights Specific Transcriptome Signatures of Yeast and Mycelial Growth Phases in the Dutch Elm Disease Fungus Ophiostoma novo-ulmi

(2015) Martha Nigg et al.   G3-Genes Genomes Genetics

Hypoxia and Temperature Regulated Morphogenesis in Candida albicans

(2015) Prashant R. Desai et al.   PLoS Genetics

Next maSigPro: updating maSigPro bioconductor package for RNA-seq time series

(2014) M. J. Nueda et al.   BIOINFORMATICS

Quorum sensing activity and control of yeast-mycelium dimorphism in Ophiostoma floccosum

(2014) Alexander Berrocal et al.   BIOTECHNOLOGY LETTERS

Control of yeast-mycelium dimorphism in vitro in Dutch elm disease fungi by manipulation of specific external stimuli

(2014) Erika Sayuri Naruzawa et al.   Fungal Biology

Establishment of invasive and non-invasive reporter systems to investigate American elm–Ophiostoma novo-ulmi interactions

(2014) S. Sherif et al.   FUNGAL GENETICS AND BIOLOGY

Functional Annotation of the Ophiostoma novo-ulmi Genome: Insights into the Phytopathogenicity of the Fungal Agent of Dutch Elm Disease

(2014) André M. Comeau et al.   Genome Biology and Evolution

Genetic Networks Inducing Invasive Growth in Saccharomyces cerevisiae Identified Through Systematic Genome-Wide Overexpression

(2013) C. A. Shively et al.   GENETICS

Characterization of the major Woronin body protein HexA of the human pathogenic mold Aspergillus fumigatus

(2013) Julia Beck et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Ustilago maydis phosphodiesterases play a role in the dimorphic switch and in pathogenicity

(2013) C. Agarwal et al.   MICROBIOLOGY-SGM

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

The Filamentous Growth MAPK Pathway Responds to Glucose Starvation Through the Mig1/2 Transcriptional Repressors in Saccharomyces cerevisiae

(2012) S. Karunanithi et al.   GENETICS

Quorum sensing activity in Ophiostoma ulmi: effects of fusel oils and branched chain amino acids on yeast-mycelial dimorphism

(2012) A. Berrocal et al.   JOURNAL OF APPLIED MICROBIOLOGY

A genome-wide transcriptional analysis of morphology determination in Candida albicans

(2012) Patricia L. Carlisle et al.   MOLECULAR BIOLOGY OF THE CELL

Mitogen-Activated Protein Kinase Signaling in Plant-Interacting Fungi: Distinct Messages from Conserved Messengers

(2012) Louis-Philippe Hamel et al.   PLANT CELL

Comparative Transcriptomics of the Saprobic and Parasitic Growth Phases in Coccidioides spp

(2012) Emily Whiston et al.   PLoS One

pH Response Pathways in Fungi: Adapting to Host-derived and Environmental Signals

(2012) Kyla Selvig et al.   MYCOBIOLOGY

Quality control and preprocessing of metagenomic datasets

(2011) R. Schmieder et al.   BIOINFORMATICS

Functional categorization of unique expressed sequence tags obtained from the yeast-like growth phase of the elm pathogen Ophiostoma novo-ulmi

(2011) William Hintz et al.   BMC GENOMICS

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

The Yak1 Protein Kinase Lies at the Center of a Regulatory Cascade Affecting Adhesive Growth and Stress Resistance in Saccharomyces cerevisiae

(2010) M. Malcher et al.   GENETICS

A Septin from the Filamentous Fungus A. nidulans Induces Atypical Pseudohyphae in the Budding Yeast S. cerevisiae

(2010) Rebecca Lindsey et al.   PLoS One

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Cdk1 and cell morphology: connections and directions

(2009) James B Moseley et al.   CURRENT OPINION IN CELL BIOLOGY

CDKs and the yeast-hyphal decision

(2009) Yue Wang   CURRENT OPINION IN MICROBIOLOGY

A multilocus phylogeny of the Metarhizium anisopliae lineage

(2009) Joseph F. Bischoff et al.   MYCOLOGIA

Fungal Colonization and Host Defense Reactions inUlmus americanaCallus Cultures Inoculated withOphiostoma novo-ulmi

(2009) Mirella Aoun et al.   PHYTOPATHOLOGY

Dimorphism in fungal plant pathogens

(2008) Marina Nadal et al.   FEMS MICROBIOLOGY LETTERS

Ambient pH gene regulation in fungi: making connections

(2008) Miguel A. Peñalva et al.   TRENDS IN MICROBIOLOGY

Large-Scale Analysis of Yeast Filamentous Growth by Systematic Gene Disruption and Overexpression

(2007) Rui Jin et al.   MOLECULAR BIOLOGY OF THE CELL