Genome-wide studies reveal novel and distinct biological pathways regulated by SIN3 isoforms
Published 2016 View Full Article
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Title
Genome-wide studies reveal novel and distinct biological pathways regulated by SIN3 isoforms
Authors
Keywords
SIN3 isoforms, <em class=EmphasisTypeItalic >Drosophila melanogaster</em>, Gene regulation, Histone modification
Journal
BMC GENOMICS
Volume 17, Issue 1, Pages -
Publisher
Springer Nature
Online
2016-02-13
DOI
10.1186/s12864-016-2428-5
References
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Note: Only part of the references are listed.- SIN3 is critical for stress resistance and modulates adult lifespan
- (2016) Valerie L. Barnes et al. Aging-US
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- (2015) Dhawal Jain et al. NUCLEIC ACIDS RESEARCH
- ngs.plot: Quick mining and visualization of next-generation sequencing data by integrating genomic databases
- (2014) Li Shen et al. BMC GENOMICS
- Histone target selection within chromatin: an exemplary case of teamwork
- (2014) M.-E. Lalonde et al. GENES & DEVELOPMENT
- A Role for H3K4 Monomethylation in Gene Repression and Partitioning of Chromatin Readers
- (2014) Jemmie Cheng et al. MOLECULAR CELL
- Whole-Genome Analysis of Muscle Founder Cells Implicates the Chromatin Regulator Sin3A in Muscle Identity
- (2014) Krista C. Dobi et al. Cell Reports
- Sin3: Insight into its transcription regulatory functions
- (2013) Rama Kadamb et al. EUROPEAN JOURNAL OF CELL BIOLOGY
- Regulation of nucleosome dynamics by histone modifications
- (2013) Gabriel E Zentner et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
- (2012) S. G. Landt et al. GENOME RESEARCH
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- Sin3a acts through a multi-gene module to regulate invasion in Drosophila and human tumors
- (2012) T K Das et al. ONCOGENE
- Measuring reproducibility of high-throughput experiments
- (2011) Qunhua Li et al. Annals of Applied Statistics
- In the loop: long range chromatin interactions and gene regulation
- (2011) A. Dean Briefings in Functional Genomics
- Chromatin-modifying Complex Component Nurf55/p55 Associates with Histones H3 and H4 and Polycomb Repressive Complex 2 Subunit Su(z)12 through Partially Overlapping Binding Sites
- (2011) Agnieszka J. Nowak et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- A cis-regulatory map of the Drosophila genome
- (2011) Nicolas Nègre et al. NATURE
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Loss of the SIN3 transcriptional corepressor results in aberrant mitochondrial function
- (2010) Valerie L Barnes et al. BMC BIOCHEMISTRY
- Systematic Protein Location Mapping Reveals Five Principal Chromatin Types in Drosophila Cells
- (2010) Guillaume J. Filion et al. CELL
- DrosophilaSIN3 Isoforms Interact with Distinct Proteins and Have Unique Biological Functions
- (2010) Marla M. Spain et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- A Novel Mammalian Complex Containing Sin3B Mitigates Histone Acetylation and RNA Polymerase II Progression within Transcribed Loci
- (2010) P. Jelinic et al. MOLECULAR AND CELLULAR BIOLOGY
- Sin3: Master scaffold and transcriptional corepressor
- (2009) Adrienne Grzenda et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- CEAS: cis-regulatory element annotation system
- (2009) Hyunjin Shin et al. BIOINFORMATICS
- Regulation of cell proliferation and wing development by Drosophila SIN3 and String
- (2009) Aishwarya Swaminathan et al. MECHANISMS OF DEVELOPMENT
- Histone Chaperones ASF1 and NAP1 Differentially Modulate Removal of Active Histone Marks by LID-RPD3 Complexes during NOTCH Silencing
- (2009) Yuri M. Moshkin et al. MOLECULAR CELL
- Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
- (2009) Da Wei Huang et al. Nature Protocols
- Drosophila SIN3 is required at multiple stages of development
- (2008) Vishal Sharma et al. DEVELOPMENTAL DYNAMICS
- Structural basis of histone H4 recognition by p55
- (2008) J.-J. Song et al. GENES & DEVELOPMENT
- A Systematic Screen for Transcriptional Regulators of the Yeast Cell Cycle
- (2008) M. A. White et al. GENETICS
- The Rpd3/Hda1 family of lysine deacetylases: from bacteria and yeast to mice and men
- (2008) Xiang-Jiao Yang et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Specific requirement of the chromatin modifier mSin3B in cell cycle exit and cellular differentiation
- (2008) G. David et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
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