Emergence and evolution of yeast prion and prion-like proteins

The Spontaneous Mutation Rate in the Fission YeastSchizosaccharomyces pombe

(2015) Ashley Farlow et al.   GENETICS

Extensive de novo mutation rate variation between individuals and across the genome ofChlamydomonas reinhardtii

(2015) Rob W. Ness et al.   GENOME RESEARCH

PrionW: a server to identify proteins containing glutamine/asparagine rich prion-like domains and their amyloid cores

(2015) Rafael Zambrano et al.   NUCLEIC ACIDS RESEARCH

Generating new prions by targeted mutation or segment duplication

(2015) Kacy R. Paul et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dictyostelium discoideumhas a highly Q/N-rich proteome and shows an unusual resilience to protein aggregation

(2015) Liliana Malinovska et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Spontaneous Mutation Rate in the Fission YeastSchizosaccharomyces pombe

(2015) Ashley Farlow et al.   GENETICS

PLAAC: a web and command-line application to identify proteins with prion-like amino acid composition

(2014) A. K. Lancaster et al.   BIOINFORMATICS

Sporadic Distribution of Prion-Forming Ability of Sup35p from Yeasts and Fungi

(2014) H. K. Edskes et al.   GENETICS

Functional Role of Tia1/Pub1 and Sup35 Prion Domains: Directing Protein Synthesis Machinery to the Tubulin Cytoskeleton

(2014) Xiang Li et al.   MOLECULAR CELL

Interaction Networks of Prion, Prionogenic and Prion-Like Proteins in Budding Yeast, and Their Role in Gene Regulation

(2014) Djamel Harbi et al.   PLoS One

­Classifying prion and prion-like phenomena

(2014) Djamel Harbi et al.   Prion

Discovering putative prion sequences in complete proteomes using probabilistic representations of Q/N-rich domains

(2013) Vladimir Espinosa Angarica et al.   BMC GENOMICS

Heritable Remodeling of Yeast Multicellularity by an Environmentally Responsive Prion

(2013) Daniel L. Holmes et al.   CELL

The [URE3] Prion in Candida

(2013) Herman K. Edskes et al.   EUKARYOTIC CELL

Mutations in prion-like domains in hnRNPA2B1 and hnRNPA1 cause multisystem proteinopathy and ALS

(2013) Hong Joo Kim et al.   NATURE

SCOPe: Structural Classification of Proteins—extended, integrating SCOP and ASTRAL data and classification of new structures

(2013) Naomi K. Fox et al.   NUCLEIC ACIDS RESEARCH

Could yeast prion domains originate from polyQ/N tracts?

(2013) Alexander I. Alexandrov et al.   Prion

A bipolar functionality of Q/N-rich proteins: Lsm4 amyloid causes clearance of yeast prions

(2013) Keita Oishi et al.   MicrobiologyOpen

The Paf1 Complex Subunit Rtf1 Buffers Cells Against the Toxic Effects of [PSI+] and Defects in Rkr1-Dependent Protein Quality Control in Saccharomyces cerevisiae

(2012) K. M. Klucevsek et al.   GENETICS

Prions are a common mechanism for phenotypic inheritance in wild yeasts

(2012) Randal Halfmann et al.   NATURE

PrionHome: A Database of Prions and Other Sequences Relevant to Prion Phenomena

(2012) Djamel Harbi et al.   PLoS One

A bipolar personality of yeast prion proteins

(2012) Hiroshi Kurahashi et al.   Prion

De novo design of synthetic prion domains

(2012) J. A. Toombs et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Yeast Prion, Mod5, Promotes Acquired Drug Resistance and Cell Survival Under Environmental Stress

(2012) G. Suzuki et al.   SCIENCE

The Landscape of the Prion Protein's Structural Response to Mutation Revealed by Principal Component Analysis of Multiple NMR Ensembles

(2012) Deena M. A. Gendoo et al.   PLoS Computational Biology

Reconstructing the Fungal Tree of Life Using Phylogenomics and a Preliminary Investigation of the Distribution of Yeast Prion-Like Proteins in the Fungal Kingdom

(2011) Edgar M. Medina et al.   JOURNAL OF MOLECULAR EVOLUTION

A Small, Glutamine-Free Domain Propagates the [SWI+] Prion in Budding Yeast

(2011) E. T. Crow et al.   MOLECULAR AND CELLULAR BIOLOGY

Opposing Effects of Glutamine and Asparagine Govern Prion Formation by Intrinsically Disordered Proteins

(2011) Randal Halfmann et al.   MOLECULAR CELL

Suicidal [PSI+] is a lethal yeast prion

(2011) R. P. McGlinchey et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Discordant and chameleon sequences: Their distribution and implications for amyloidogenicity

(2011) Deena M.A. Gendoo et al.   PROTEIN SCIENCE

LPS-annotate: complete annotation of compositionally biased regions in the protein knowledgebase

(2011) D. Harbi et al.   Database-The Journal of Biological Databases and Curation

Genome Evolution in the Eremothecium Clade of the Saccharomyces Complex Revealed by Comparative Genomics

(2011) Jürgen Wendland et al.   G3-Genes Genomes Genetics

Molecular Determinants and Genetic Modifiers of Aggregation and Toxicity for the ALS Disease Protein FUS/TLS

(2011) Zhihui Sun et al.   PLOS BIOLOGY

Aplysia CPEB Can Form Prion-like Multimers in Sensory Neurons that Contribute to Long-Term Facilitation

(2010) Kausik Si et al.   CELL

Distinct Subregions of Swi1 Manifest Striking Differences in Prion Transmission and SWI/SNF Function

(2010) Z. Du et al.   MOLECULAR AND CELLULAR BIOLOGY

Amyloid-like interactions within nucleoporin FG hydrogels

(2010) C. Ader et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Non-Mendelian determinant [ISP+] in yeast is a nuclear-residing prion form of the global transcriptional regulator Sfp1

(2010) T. Rogoza et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Systematic Survey Identifies Prions and Illuminates Sequence Features of Prionogenic Proteins

(2009) Simon Alberti et al.   CELL

A Promiscuous Prion: Efficient Induction of [URE3] Prion Formation by Heterologous Prion Domains

(2009) C. D. Ross et al.   GENETICS

The yeast global transcriptional co-repressor protein Cyc8 can propagate as a prion

(2009) Basant K. Patel et al.   NATURE CELL BIOLOGY

Newly identified prion linked to the chromatin-remodeling factor Swi1 in Saccharomyces cerevisiae

(2008) Zhiqiang Du et al.   NATURE GENETICS