- Home
- Publications
- Publication Search
- Publication Details
Title
Secondary structure impacts patterns of selection in human lncRNAs
Authors
Keywords
lncRNA, Purifying selection, Divergence, Polymorphism, Secondary structure
Journal
BMC BIOLOGY
Volume 14, Issue 1, Pages -
Publisher
Springer Nature
Online
2016-07-25
DOI
10.1186/s12915-016-0283-0
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Human Long Noncoding RNAs Are Substantially Less Folded than Messenger RNAs
- (2015) Jian-Rong Yang et al. MOLECULAR BIOLOGY AND EVOLUTION
- Tree of Life Reveals Clock-Like Speciation and Diversification
- (2015) S. Blair Hedges et al. MOLECULAR BIOLOGY AND EVOLUTION
- HOTAIR Forms an Intricate and Modular Secondary Structure
- (2015) Srinivas Somarowthu et al. MOLECULAR CELL
- No evidence that selection has been less effective at removing deleterious mutations in Europeans than in Africans
- (2015) Ron Do et al. NATURE GENETICS
- The landscape of long noncoding RNAs in the human transcriptome
- (2015) Matthew K Iyer et al. NATURE GENETICS
- Comparison of splice sites reveals that long noncoding RNAs are evolutionarily well conserved
- (2015) Anne Nitsche et al. RNA
- Unexpected selection to retain high GC content and splicing enhancers within exons of multiexonic lncRNA loci
- (2015) Wilfried Haerty et al. RNA
- Principles of Long Noncoding RNA Evolution Derived from Direct Comparison of Transcriptomes in 17 Species
- (2015) Hadas Hezroni et al. Cell Reports
- Evolutionary dynamics and tissue specificity of human long noncoding RNAs in six mammals
- (2014) S. Washietl et al. GENOME RESEARCH
- Purifying Selection on Splice-Related Motifs, Not Expression Level nor RNA Folding, Explains Nearly All Constraint on Human lincRNAs
- (2014) Andreas Schüler et al. MOLECULAR BIOLOGY AND EVOLUTION
- PopGenome: An Efficient Swiss Army Knife for Population Genomic Analyses in R
- (2014) Bastian Pfeifer et al. MOLECULAR BIOLOGY AND EVOLUTION
- The evolution of lncRNA repertoires and expression patterns in tetrapods
- (2014) Anamaria Necsulea et al. NATURE
- lncRNAdb v2.0: expanding the reference database for functional long noncoding RNAs
- (2014) Xiu Cheng Quek et al. NUCLEIC ACIDS RESEARCH
- lncRNASNP: a database of SNPs in lncRNAs and their potential functions in human and mouse
- (2014) Jing Gong et al. NUCLEIC ACIDS RESEARCH
- Evolutionary conservation of long non-coding RNAs; sequence, structure, function
- (2013) Per Johnsson et al. BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS
- lincRNAs: Genomics, Evolution, and Mechanisms
- (2013) Igor Ulitsky et al. CELL
- In vivo genome-wide profiling of RNA secondary structure reveals novel regulatory features
- (2013) Yiliang Ding et al. NATURE
- Widespread purifying selection on RNA structure in mammals
- (2013) Martin A. Smith et al. NUCLEIC ACIDS RESEARCH
- Mutations within lncRNAs are effectively selected against in fruitfly but not in human
- (2013) Wilfried Haerty et al. GENOME BIOLOGY
- Long noncoding RNAs in C. elegans
- (2012) J.-W. Nam et al. GENOME RESEARCH
- Genome-wide analysis of long noncoding RNA stability
- (2012) M. B. Clark et al. GENOME RESEARCH
- The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
- (2012) T. Derrien et al. GENOME RESEARCH
- Structural architecture of the human long non-coding RNA, steroid receptor RNA activator
- (2012) Irina V. Novikova et al. NUCLEIC ACIDS RESEARCH
- Formation of triple-helical structures by the 3'-end sequences of MALAT1 and MEN noncoding RNAs
- (2012) J. A. Brown et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Computational analysis of functional long noncoding RNAs reveals lack of peptide-coding capacity and parallels with 3' UTRs
- (2012) F. Niazi et al. RNA
- Rapid Turnover of Long Noncoding RNAs and the Evolution of Gene Expression
- (2012) Claudia Kutter et al. PLoS Genetics
- The variant call format and VCFtools
- (2011) P. Danecek et al. BIOINFORMATICS
- Conserved Function of lincRNAs in Vertebrate Embryonic Development despite Rapid Sequence Evolution
- (2011) Igor Ulitsky et al. CELL
- Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
- (2011) M. N. Cabili et al. GENES & DEVELOPMENT
- Sequence shortening in the rodent ancestor
- (2011) S. Laurie et al. GENOME RESEARCH
- Recombination Gives a New Insight in the Effective Population Size and the History of the Old World Human Populations
- (2011) Marta Melé et al. MOLECULAR BIOLOGY AND EVOLUTION
- Inference of human population history from individual whole-genome sequences
- (2011) Heng Li et al. NATURE
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
- (2010) Rajnish A. Gupta et al. NATURE
- lncRNAdb: a reference database for long noncoding RNAs
- (2010) Paulo P. Amaral et al. NUCLEIC ACIDS RESEARCH
- CpG island hypermethylation-associated silencing of non-coding RNAs transcribed from ultraconserved regions in human cancer
- (2010) A Lujambio et al. ONCOGENE
- A structural interpretation of the effect of GC-content on efficiency of RNA interference
- (2009) Chi Chan et al. BMC BIOINFORMATICS
- Evolution and Functions of Long Noncoding RNAs
- (2009) Chris P. Ponting et al. CELL
- H19 acts as a trans regulator of the imprinted gene network controlling growth in mice
- (2009) A. Gabory et al. DEVELOPMENT
- Maternally Expressed Gene 3 (MEG3) Noncoding Ribonucleic Acid: Isoform Structure, Expression, and Functions
- (2009) Xun Zhang et al. ENDOCRINOLOGY
- Detection of nonneutral substitution rates on mammalian phylogenies
- (2009) K. S. Pollard et al. GENOME RESEARCH
- Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
- (2009) Mitchell Guttman et al. NATURE
- Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
- (2009) Ahmad M. Khalil et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now