An ensemble framework for identifying essential proteins

United Complex Centrality for Identification of Essential Proteins from PPI Networks

(2017) Min Li et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Predicting Essential Genes and Proteins Based on Machine Learning and Network Topological Features: A Comprehensive Review

(2016) Xue Zhang et al.   Frontiers in Physiology

CytoNCA: A cytoscape plugin for centrality analysis and evaluation of protein interaction networks

(2015) Yu Tang et al.   BIOSYSTEMS

Identifying essential proteins from active PPI networks constructed with dynamic gene expression

(2015) Qianghua Xiao et al.   BMC GENOMICS

A Topology Potential-Based Method for Identifying Essential Proteins from PPI Networks

(2015) Min Li et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Discovering essential proteins based on PPI network and protein complex

(2015) Jun Ren et al.   International Journal of Data Mining and Bioinformatics

A feature selection method for prediction essential protein

(2015) Jiancheng Zhong et al.   TSINGHUA SCIENCE AND TECHNOLOGY

[Front cover]

(2014)   IEEE TRANSACTIONS ON NANOBIOSCIENCE

Effective identification of essential proteins based on priori knowledge, network topology and gene expressions

(2014) Min Li et al.   METHODS

A New Method for the Discovery of Essential Proteins

(2013) Xue Zhang et al.   PLoS One

A new essential protein discovery method based on the integration of protein-protein interaction and gene expression data

(2012) Min Li et al.   BMC Systems Biology

Computational approaches to predicting essential proteins: A survey

(2012) Jianxin Wang et al.   Proteomics Clinical Applications

IDENTIFICATION OF ESSENTIAL PROTEINS FROM WEIGHTED PROTEIN–PROTEIN INTERACTION NETWORKS

(2012) MIN LI et al.   Journal of Bioinformatics and Computational Biology

Comparative genomics allowed the identification of drug targets against human fungal pathogens

(2011) Ana Karina R Abadio et al.   BMC GENOMICS

A local average connectivity-based method for identifying essential proteins from the network level

(2011) Min Li et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

Identification of Essential Proteins Based on Edge Clustering Coefficient

(2011) Jianxin Wang et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Defining the Role of Essential Genes in Human Disease

(2011) Jonathan E. Dickerson et al.   PLoS One

Examination of the relationship between essential genes in PPI network and hub proteins in reverse nearest neighbor topology

(2010) Kang Ning et al.   BMC BIOINFORMATICS

Struct2Net: a web service to predict protein-protein interactions using a structure-based approach

(2010) R. Singh et al.   NUCLEIC ACIDS RESEARCH

Ensemble-based classifiers

(2009) Lior Rokach   ARTIFICIAL INTELLIGENCE REVIEW

Towards the prediction of essential genes by integration of network topology, cellular localization and biological process information

(2009) Marcio L Acencio et al.   BMC BIOINFORMATICS

Identifying Hubs in Protein Interaction Networks

(2009) Ravishankar R. Vallabhajosyula et al.   PLoS One

DEG 5.0, a database of essential genes in both prokaryotes and eukaryotes

(2008) R. Zhang et al.   NUCLEIC ACIDS RESEARCH

High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

(2008) H. Yu et al.   SCIENCE

Why Do Hubs in the Yeast Protein Interaction Network Tend To Be Essential: Reexamining the Connection between the Network Topology and Essentiality

(2008) Elena Zotenko et al.   PLoS Computational Biology