Neural field models for latent state inference: Application to large-scale neuronal recordings

Seizure Dynamics of Coupled Oscillators with Epileptor Field Model

(2018) Honghui Zhang et al.   INTERNATIONAL JOURNAL OF BIFURCATION AND CHAOS

Predicting the spatiotemporal diversity of seizure propagation and termination in human focal epilepsy

(2018) Timothée Proix et al.   Nature Communications

Autoregressive Point Processes as Latent State-Space Models: A Moment-Closure Approach to Fluctuations and Autocorrelations

(2018) Michael Rule et al.   NEURAL COMPUTATION

Approximation and inference methods for stochastic biochemical kinetics—a tutorial review

(2017) David Schnoerr et al.   Journal of Physics A-Mathematical and Theoretical

Variational Latent Gaussian Process for Recovering Single-Trial Dynamics from Population Spike Trains

(2017) Yuan Zhao et al.   NEURAL COMPUTATION

Human seizures couple across spatial scales through travelling wave dynamics

(2017) L-E Martinet et al.   Nature Communications

Inference and Decoding of Motor Cortex Low-Dimensional Dynamics via Latent State-Space Models

(2016) Mehdi Aghagolzadeh et al.   IEEE TRANSACTIONS ON NEURAL SYSTEMS AND REHABILITATION ENGINEERING

From point process observations to collective neural dynamics: Nonlinear Hawkes process GLMs, low-dimensional dynamics and coarse graining

(2016) Wilson Truccolo   JOURNAL OF PHYSIOLOGY-PARIS

Sparse Approximate Inference for Spatio-Temporal Point Process Models

(2016) Botond Cseke et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Cox process representation and inference for stochastic reaction–diffusion processes

(2016) David Schnoerr et al.   Nature Communications

Perspective: Sloppiness and emergent theories in physics, biology, and beyond

(2015) Mark K. Transtrum et al.   JOURNAL OF CHEMICAL PHYSICS

Sloppiness in Spontaneously Active Neuronal Networks

(2015) D. Panas et al.   JOURNAL OF NEUROSCIENCE

A Biologically Constrained, Mathematical Model of Cortical Wave Propagation Preceding Seizure Termination

(2015) Laura R. González-Ramírez et al.   PLoS Computational Biology

The complex chemical Langevin equation

(2014) David Schnoerr et al.   JOURNAL OF CHEMICAL PHYSICS

A Reaction-Diffusion Model of Cholinergic Retinal Waves

(2014) Benjamin Lansdell et al.   PLoS Computational Biology

A general moment expansion method for stochastic kinetic models

(2013) Angelique Ale et al.   JOURNAL OF CHEMICAL PHYSICS

Following the ontogeny of retinal waves: pan-retinal recordings of population dynamics in the neonatal mouse

(2013) Alessandro Maccione et al.   JOURNAL OF PHYSIOLOGY-LONDON

Neural masses and fields in dynamic causal modeling

(2013) Rosalyn Moran et al.   Frontiers in Computational Neuroscience

Laws of Large Numbers and Langevin Approximations for Stochastic Neural Field Equations

(2013) Martin G Riedler et al.   Journal of Mathematical Neuroscience

Point process modelling of the Afghan War Diary

(2012) A. Zammit-Mangion et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

EMG Prediction From Motor Cortical Recordings via a Nonnegative Point-Process Filter

(2011) K. Nazarpour et al.   IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING

Finite-size and correlation-induced effects in mean-field dynamics

(2011) Jonathan D. Touboul et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Age-dependent Homeostatic Plasticity of GABAergic Signaling in Developing Retinal Networks

(2011) M. H. Hennig et al.   JOURNAL OF NEUROSCIENCE

Spatiotemporal dynamics of continuum neural fields

(2011) Paul C Bressloff   Journal of Physics A-Mathematical and Theoretical

Dynamic causal modeling with neural fields

(2011) D.A. Pinotsis et al.   NEUROIMAGE

A Model for the Origin and Properties of Flicker-Induced Geometric Phosphenes

(2011) Michael Rule et al.   PLoS Computational Biology

Connecting Mean Field Models of Neural Activity to EEG and fMRI Data

(2010) Ingo Bojak et al.   BRAIN TOPOGRAPHY

A new look at state-space models for neural data

(2009) Liam Paninski et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Early-Stage Waves in the Retinal Network Emerge Close to a Critical State Transition between Local and Global Functional Connectivity

(2009) M. H. Hennig et al.   JOURNAL OF NEUROSCIENCE

Collective dynamics in human and monkey sensorimotor cortex: predicting single neuron spikes

(2009) Wilson Truccolo et al.   NATURE NEUROSCIENCE

Systematic Fluctuation Expansion for Neural Network Activity Equations

(2009) Michael A. Buice et al.   NEURAL COMPUTATION

Synaptic and Extrasynaptic Factors Governing Glutamatergic Retinal Waves

(2009) Aaron G. Blankenship et al.   NEURON

Statistical mechanics of the neocortex

(2009) Michael A. Buice et al.   PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY

Stochastic Neural Field Theory and the System-Size Expansion

(2009) Paul C. Bressloff   SIAM JOURNAL ON APPLIED MATHEMATICS

Spatio-temporal correlations and visual signalling in a complete neuronal population

(2008) Jonathan W. Pillow et al.   NATURE

A Master Equation Formalism for Macroscopic Modeling of Asynchronous Irregular Activity States

(2008) Sami El Boustani et al.   NEURAL COMPUTATION