Gene expression response to a nematode parasite in novel and native eel hosts

Experimental infection with Anguillicola crassus alters immune gene expression in both spleen and head kidney of the European eel (Anguilla anguilla)

(2019) Seraina E. Bracamonte et al.   Marine Genomics

Freshwater eels: A symbol of the effects of global change

(2018) Hilaire Drouineau et al.   FISH AND FISHERIES

The Immune and Non-Immune Pathways That Drive Chronic Gastrointestinal Helminth Burdens in the Wild

(2018) Simon A. Babayan et al.   Frontiers in Immunology

Gene expression differs in susceptible and resistant amphibians exposed to Batrachochytrium dendrobatidis

(2018) Evan A. Eskew et al.   Royal Society Open Science

On the actual recruitment of European eel (Anguilla anguilla ) in the River Ems, Germany

(2018) Markus Diekmann et al.   FISHERIES MANAGEMENT AND ECOLOGY

Modelling the recruitment of European eel (Anguilla anguilla) throughout its European range

(2017) Virginie Bornarel et al.   ICES JOURNAL OF MARINE SCIENCE

Transcriptomic responses of water buffalo liver to infection with the digenetic fluke Fasciola gigantica

(2017) Fu-Kai Zhang et al.   Parasites & Vectors

Anguillicola crassus infection affects mRNA expression levels in gas gland tissue of European yellow and silver eel

(2017) Gabriel Schneebauer et al.   PLoS One

The other white-nose syndrome transcriptome: Tolerant and susceptible hosts respond differently to the pathogen Pseudogymnoascus destructans

(2017) Christina M. Davy et al.   Ecology and Evolution

RNA-seq analysis of early enteromyxosis in turbot (Scophthalmus maximus): new insights into parasite invasion and immune evasion strategies

(2016) Paolo Ronza et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Transcriptome profiling of immune tissues reveals habitat-specific gene expression between lake and river sticklebacks

(2016) Yun Huang et al.   MOLECULAR ECOLOGY

Comparative study of host response to chytridiomycosis in a susceptible and a resistant toad species

(2016) T. J. Poorten et al.   MOLECULAR ECOLOGY

The power and promise of RNA-seq in ecology and evolution

(2016) Erica V. Todd et al.   MOLECULAR ECOLOGY

Comparative transcriptomics of stickleback immune gene responses upon infection by two helminth parasites, Diplostomum pseudospathaceum and Schistocephalus solidus

(2016) David Haase et al.   ZOOLOGY

Did a “perfect storm” of oceanic changes and continental anthropogenic impacts cause northern hemisphere anguillid recruitment reductions?

(2015) Michael J. Miller et al.   ICES JOURNAL OF MARINE SCIENCE

Relationship between European eelAnguilla anguillainfection with non-native parasites and swimming behaviour on encountering accelerating flow

(2015) L. R. Newbold et al.   JOURNAL OF FISH BIOLOGY

Among-lake reciprocal transplants induce convergent expression of immune genes in threespine stickleback

(2015) William E. Stutz et al.   MOLECULAR ECOLOGY

Transcriptional analysis identifies key genes involved in metabolism, fibrosis/tissue repair and the immune response against Fasciola hepatica in sheep liver

(2015) Cristian A Alvarez Rojas et al.   Parasites & Vectors

Identification of differentially expressed genes of brown trout (Salmo trutta) and rainbow trout (Oncorhynchus mykiss) in response to Tetracapsuloides bryosalmonae (Myxozoa)

(2015) Gokhlesh Kumar et al.   PARASITOLOGY RESEARCH

The White-Nose Syndrome Transcriptome: Activation of Anti-fungal Host Responses in Wing Tissue of Hibernating Little Brown Myotis

(2015) Kenneth A. Field et al.   PLoS Pathogens

Swimbladder function and the spawning migration of the European eel Anguilla anguilla

(2015) Bernd Pelster   Frontiers in Physiology

Synergistic patterns of threat and the challenges facing global anguillid eel conservation

(2015) David M.P. Jacoby et al.   Global Ecology and Conservation

RNA-seq analysis reveals significant transcriptome changes in turbot (Scophthalmus maximus) suffering severe enteromyxosis

(2015) Diego Robledo et al.   BMC GENOMICS

Rapid evolution of Anguillicola crassusin Europe: species diagnostic traits are plastic and evolutionarily labile

(2014) Urszula Weclawski et al.   Frontiers in Zoology

More than Skin Deep: Functional Genomic Basis for Resistance to Amphibian Chytridiomycosis

(2014) Amy R. Ellison et al.   Genome Biology and Evolution

Transcriptome analyses ofAnguillicola crassusfrom native and novel hosts

(2014) Emanuel Heitlinger et al.   PeerJ

Evolutionary divergence of the swim bladder nematode Anguillicola crassus after colonization of a novel host, Anguilla anguilla

(2013) Urszula Weclawski et al.   BMC EVOLUTIONARY BIOLOGY

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Is the continental life of the European eel Anguilla anguilla affected by the parasitic invader Anguillicoloides crassus?

(2013) F. Lefebvre et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Fish immune responses against endoparasitic nematodes - experimental models

(2012) K Buchmann   JOURNAL OF FISH DISEASES

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

What is needed for next-generation ecological and evolutionary genomics?

(2012) Scott A. Pavey et al.   TRENDS IN ECOLOGY & EVOLUTION

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Varroamites and honey bee health: canVarroaexplain part of the colony losses?

(2010) Yves Le Conte et al.   APIDOLOGIE

Non-native aquatic animals introductions have driven disease emergence in Europe

(2010) Edmund J. Peeler et al.   BIOLOGICAL INVASIONS

BIODIVERSITY RESEARCH: Parasites of exotic species in invaded areas: does lower diversity mean lower epizootic impact?

(2010) Sergey E. Mastitsky et al.   DIVERSITY AND DISTRIBUTIONS

Differential gene expression of the honey bees Apis mellifera and A. cerana induced by Varroa destructor infection

(2010) Yi Zhang et al.   JOURNAL OF INSECT PHYSIOLOGY

Tackling the widespread and critical impact of batch effects in high-throughput data

(2010) Jeffrey T. Leek et al.   NATURE REVIEWS GENETICS

Structure and function of enzymes in heme biosynthesis

(2010) Gunhild Layer et al.   PROTEIN SCIENCE

An Emerging Disease Causes Regional Population Collapse of a Common North American Bat Species

(2010) W. F. Frick et al.   SCIENCE

Molecular mechanism and function of CD40/CD40L engagement in the immune system

(2009) Raul Elgueta et al.   IMMUNOLOGICAL REVIEWS

Changes in Gene Expression in European Eels (Anguilla anguilla) Induced by Infection with Swim Bladder Nematodes (Anguillicola crassus)

(2009) Géraldine Fazio et al.   JOURNAL OF PARASITOLOGY

Massive encapsulation of larval Anguillicoloides crassus in the intestinal wall of Japanese eels

(2009) Emanuel G Heitlinger et al.   Parasites & Vectors

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Vaccination of eels (Anguilla japonica and Anguilla anguilla) against Anguillicola crassus with irradiated L3

(2008) K. KNOPF et al.   PARASITOLOGY

Decomposing health: tolerance and resistance to parasites in animals

(2008) L. Raberg et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Fish immunity and parasite infections: from innate immunity to immunoprophylactic prospects

(2008) Pilar Alvarez-Pellitero   VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY

Animal Defenses against Infectious Agents: Is Damage Control More Important Than Pathogen Control

(2008) Andrew F Read et al.   PLOS BIOLOGY