High Diversity and Novel Enteric Viruses in Fecal Viromes of Healthy Wild and Captive Thai Cynomolgus Macaques (Macaca fascicularis)

Gut mucosal virome alterations in ulcerative colitis

(2019) Tao Zuo et al.   GUT

Dynamic Modulation of the Gut Microbiota and Metabolome by Bacteriophages in a Mouse Model

(2019) Bryan B. Hsu et al.   Cell Host & Microbe

Detection and molecular characterization of novel porcine parvovirus 7 in Anhui province from Central-Eastern China

(2019) Yong Wang et al.   INFECTION GENETICS AND EVOLUTION

Laboratory mice born to wild mice have natural microbiota and model human immune responses

(2019) Stephan P. Rosshart et al.   SCIENCE

Viral networks and detection of potential zoonotic viruses in bats and rodents: A worldwide analysis

(2019) Fabiola Nieto-Rabiela et al.   Zoonoses and Public Health

An Ancient Lineage of Highly Divergent Parvoviruses Infects both Vertebrate and Invertebrate Hosts

(2019) Judit J. Pénzes et al.   Viruses-Basel

Human Virome and Disease: High-Throughput Sequencing for Virus Discovery, Identification of Phage-Bacteria Dysbiosis and Development of Therapeutic Approaches with Emphasis on the Human Gut

(2019) Tasha M. Santiago-Rodriguez et al.   Viruses-Basel

Smacoviridae: a new family of animal-associated single-stranded DNA viruses

(2018) Arvind Varsani et al.   ARCHIVES OF VIROLOGY

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Extensive conservation of prokaryotic ribosomal binding sites in known and novel picobirnaviruses

(2018) Siddharth R. Krishnamurthy et al.   VIROLOGY

An Atypical Parvovirus Drives Chronic Tubulointerstitial Nephropathy and Kidney Fibrosis

(2018) Ben Roediger et al.   CELL

The Intestinal Virome and Immunity

(2018) Jessica A. Neil et al.   JOURNAL OF IMMUNOLOGY

Enteric Virome and Bacterial Microbiota in Children with Ulcerative Colitis and Crohnʼs Disease

(2018) Melissa A. Fernandes et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

Multiple divergent picobirnaviruses with functional prokaryotic Shine-Dalgarno ribosome binding sites present in cloacal sample of a diarrheic chicken

(2018) Ákos Boros et al.   VIROLOGY

Virome biogeography in the lower gastrointestinal tract of rhesus macaques with chronic diarrhea

(2018) Guoyan Zhao et al.   VIROLOGY

Complex virome in feces from Amerindian children in isolated Amazonian villages

(2018) Juliana D. Siqueira et al.   Nature Communications

Replication of MERS and SARS coronaviruses in bat cells offers insights to their ancestral origins

(2018) Susanna K. P. Lau et al.   Emerging Microbes & Infections

From bench to almost bedside: the long road to a licensed Ebola virus vaccine

(2017) Gary Wong et al.   EXPERT OPINION ON BIOLOGICAL THERAPY

Molecular Evolution of MERS Coronavirus: Dromedaries as a Recent Intermediate Host or Long-Time Animal Reservoir?

(2017) Susanna Lau et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

ICTV Virus Taxonomy Profile: Picornaviridae

(2017) R. Zell et al.   JOURNAL OF GENERAL VIROLOGY

Case-Control Comparison of Enteric Viromes in Captive Rhesus Macaques with Acute or Idiopathic Chronic Diarrhea

(2017) Beatrix Kapusinszky et al.   JOURNAL OF VIROLOGY

Host and viral traits predict zoonotic spillover from mammals

(2017) Kevin J. Olival et al.   NATURE

Anellovirus loads are associated with outcomes in pediatric lung transplantation

(2017) Joshua A. Blatter et al.   PEDIATRIC TRANSPLANTATION

Sustained fecal-oral human-to-human transmission following a zoonotic event

(2017) Miranda de Graaf et al.   Current Opinion in Virology

Viral communities of the human gut: metagenomic analysis of composition and dynamics

(2017) Varun Aggarwala et al.   Mobile DNA

SIV Infection-Mediated Changes in Gastrointestinal Bacterial Microbiome and Virome Are Associated with Immunodeficiency and Prevented by Vaccination

(2016) Scott A. Handley et al.   Cell Host & Microbe

Evidence for zoonotic origins of Middle East respiratory syndrome coronavirus

(2016) Hui-Ju Han et al.   JOURNAL OF GENERAL VIROLOGY

Complete Unique Genome Sequence, Expression Profile, and Salivary Gland Tissue Tropism of the Herpesvirus 7 Homolog in Pigtailed Macaques

(2016) Jeannette P. Staheli et al.   JOURNAL OF VIROLOGY

Translational research on influenza virus infection using a nonhuman primate model

(2016) Yasushi Itoh   PATHOLOGY INTERNATIONAL

A first report of non-invasive adenovirus detection in wild Assamese macaques in Thailand

(2016) Manakorn Sukmak et al.   PRIMATES

Healthy human gut phageome

(2016) Pilar Manrique et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Middle East Respiratory Syndrome Coronavirus (MERS-CoV) origin and animal reservoir

(2016) Hamzah A. Mohd et al.   Virology Journal

Discovery of a novel Parvovirinae virus, porcine parvovirus 7, by metagenomic sequencing of porcine rectal swabs

(2016) Rachel M. Palinski et al.   VIRUS GENES

Forna (force-directed RNA): Simple and effective online RNA secondary structure diagrams

(2015) Peter Kerpedjiev et al.   BIOINFORMATICS

Disease-Specific Alterations in the Enteric Virome in Inflammatory Bowel Disease

(2015) Jason M. Norman et al.   CELL

Molecular epidemiology and evolution of porcine parvoviruses

(2015) André Felipe Streck et al.   INFECTION GENETICS AND EVOLUTION

Exposure to Macaque Monkey Bite

(2015) William F. Johnston et al.   JOURNAL OF EMERGENCY MEDICINE

Expert Review of Evidence Bases for Managing Monkey Bites in Travelers

(2015) Nicholas J. Riesland et al.   JOURNAL OF TRAVEL MEDICINE

Comparing viral metagenomics methods using a highly multiplexed human viral pathogens reagent

(2015) Linlin Li et al.   JOURNAL OF VIROLOGICAL METHODS

Early life dynamics of the human gut virome and bacterial microbiome in infants

(2015) Efrem S Lim et al.   NATURE MEDICINE

An ensemble strategy that significantly improves de novo assembly of microbial genomes from metagenomic next-generation sequencing data

(2015) Xutao Deng et al.   NUCLEIC ACIDS RESEARCH

Gut DNA viromes of Malawian twins discordant for severe acute malnutrition

(2015) Alejandro Reyes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A critical analysis of the cynomolgus macaque, Macaca fascicularis, as a model to test HIV-1/SIV vaccine efficacy

(2015) Joseph M. Antony et al.   VACCINE

Non-random patterns in viral diversity

(2015) Simon J. Anthony et al.   Nature Communications

Viral Metagenomics Reveal Blooms of Anelloviruses in the Respiratory Tract of Lung Transplant Recipients

(2014) J. C. Young et al.   AMERICAN JOURNAL OF TRANSPLANTATION

The Virome in Mammalian Physiology and Disease

(2014) Herbert W. Virgin   CELL

Faecal virome of cats in an animal shelter

(2014) W. Zhang et al.   JOURNAL OF GENERAL VIROLOGY

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

Natural infection of human adenovirus 36 in rhesus monkeys is associated with a reduction in fasting glucose 恒河猴自然感染人36型腺病毒与空腹血糖下降有关

(2014) Nikhil V. Dhurandhar et al.   Journal of Diabetes

Temporal Response of the Human Virome to Immunosuppression and Antiviral Therapy

(2013) Iwijn De Vlaminck et al.   CELL

Characterization of three novel human papillomavirus types isolated from oral rinse samples of healthy individuals

(2013) Erin Martin et al.   JOURNAL OF CLINICAL VIROLOGY

AIDS Alters the Commensal Plasma Virome

(2013) L. Li et al.   JOURNAL OF VIROLOGY

Experimental Cross-Species Infection of Common Marmosets by Titi Monkey Adenovirus

(2013) Guixia Yu et al.   PLoS One

The natural history of porcine circovirus type 2: From an inoffensive virus to a devastating swine disease?

(2013) Joaquim Segalés et al.   VETERINARY MICROBIOLOGY

Pathogenic Simian Immunodeficiency Virus Infection Is Associated with Expansion of the Enteric Virome

(2012) Scott A. Handley et al.   CELL

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Evolution and Diversity of the Microviridae Viral Family through a Collection of 81 New Complete Genomes Assembled from Virome Reads

(2012) Simon Roux et al.   PLoS One

Animal virus discovery: improving animal health, understanding zoonoses, and opportunities for vaccine development

(2012) Eric Delwart   Current Opinion in Virology

The Fecal Viral Flora of California Sea Lions

(2011) L. Li et al.   JOURNAL OF VIROLOGY

Novel Adenoviruses in Wild Primates: a High Level of Genetic Diversity and Evidence of Zoonotic Transmissions

(2011) D. Wevers et al.   JOURNAL OF VIROLOGY

A Distinct Class of Internal Ribosomal Entry Site in Members of the Kobuvirus and Proposed Salivirus and Paraturdivirus Genera of the Picornaviridae

(2011) T. R. Sweeney et al.   JOURNAL OF VIROLOGY

Microviridae Goes Temperate: Microvirus-Related Proviruses Reside in the Genomes of Bacteroidetes

(2011) Mart Krupovic et al.   PLoS One

Correction: Cross-Species Transmission of a Novel Adenovirus Associated with a Fulminant Pneumonia Outbreak in a New World Monkey Colony

(2011) Eunice C. Chen et al.   PLoS Pathogens

The Fecal Viral Flora of Wild Rodents

(2011) Tung G. Phan et al.   PLoS Pathogens

Bat Guano Virome: Predominance of Dietary Viruses from Insects and Plants plus Novel Mammalian Viruses

(2010) L. Li et al.   JOURNAL OF VIROLOGY

The evolution of HIV-1 and the origin of AIDS

(2010) P. M. Sharp et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

REVIEW PAPER: Emerging and Reemerging Infectious Diseases of Nonhuman Primates in the Laboratory Setting

(2010) C. Bailey et al.   VETERINARY PATHOLOGY

Novel circular DNA viruses in stool samples of wild-living chimpanzees

(2009) O. Blinkova et al.   JOURNAL OF GENERAL VIROLOGY

Complete genome sequence analysis of Seneca Valley virus-001, a novel oncolytic picornavirus

(2008) L. M. Hales et al.   JOURNAL OF GENERAL VIROLOGY