Discovery of new cellulases from the metagenome by a metagenomics-guided strategy

Characterization of hemicellulase and cellulase from the extremely thermophilic bacterium Caldicellulosiruptor owensensis and their potential application for bioconversion of lignocellulosic biomass without pretreatment

(2015) Xiaowei Peng et al.   Biotechnology for Biofuels

Enzymatic hydrolysis of lignocellulosic polysaccharides in the presence of ionic liquids

(2015) R. M. Wahlström et al.   GREEN CHEMISTRY

Estimating the success of enzyme bioprospecting through metagenomics: current status and future trends

(2015) Manuel Ferrer et al.   Microbial Biotechnology

SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information

(2014) Marco Biasini et al.   NUCLEIC ACIDS RESEARCH

Thermophilic microbial cellulose decomposition and methanogenesis pathways recharacterized by metatranscriptomic and metagenomic analysis

(2014) Yu Xia et al.   Scientific Reports

Discovery of (hemi-) cellulase genes in a metagenomic library from a biogas digester using 454 pyrosequencing

(2013) Xing Yan et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A novel multifunctional cellulolytic enzyme screened from metagenomic resources representing ruminal bacteria

(2013) Kyong-Cheol Ko et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Biomining active cellulases from a mining bioremediation system

(2013) Keith Mewis et al.   JOURNAL OF BIOTECHNOLOGY

Strategy for screening metagenomic resources for exocellulase activity using a robotic, high-throughput screening system

(2013) Kyong-Cheol Ko et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Mining of Novel Thermo-Stable Cellulolytic Genes from a Thermophilic Cellulose-Degrading Consortium by Metagenomics

(2013) Yu Xia et al.   PLoS One

MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads

(2012) Toshiaki Namiki et al.   NUCLEIC ACIDS RESEARCH

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

(2012) Yanbin Yin et al.   NUCLEIC ACIDS RESEARCH

Dissecting structure–function–stability relationships of a thermostable GH5-CBM3 cellulase fromBacillus subtilis168

(2011) Camila R. Santos et al.   BIOCHEMICAL JOURNAL

A metagenome of a full-scale microbial community carrying out enhanced biological phosphorus removal

(2011) Mads Albertsen et al.   ISME Journal

Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen

(2011) M. Hess et al.   SCIENCE

Accelerated Profile HMM Searches

(2011) Sean R. Eddy   PLoS Computational Biology

Toward the estimation of the absolute quality of individual protein structure models

(2010) Pascal Benkert et al.   BIOINFORMATICS

Metagenomic era for biocatalyst identification

(2010) Lucía Fernández-Arrojo et al.   CURRENT OPINION IN BIOTECHNOLOGY

Ab initio gene identification in metagenomic sequences

(2010) Wenhan Zhu et al.   NUCLEIC ACIDS RESEARCH

Functional metagenomics for enzyme discovery: challenges to efficient screening

(2009) Taku Uchiyama et al.   CURRENT OPINION IN BIOTECHNOLOGY

The Twin-Arginine Signal Peptide of Bacillus subtilis YwbN Can Direct either Tat- or Sec-Dependent Secretion of Different Cargo Proteins: Secretion of Active Subtilisin via the B. subtilis Tat Pathway

(2008) M. A. B. Kolkman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

(2008) B. L. Cantarel et al.   NUCLEIC ACIDS RESEARCH