DNA methylation and gene expression profiles characterize epigenetic regulation of lncRNAs in colon adenocarcinoma

Long noncoding RNA Pvt1 regulates the immunosuppression activity of granulocytic myeloid-derived suppressor cells in tumor-bearing mice

(2019) Yu Zheng et al.   Molecular Cancer

Pan-cancer analysis on microRNA-associated gene activation

(2019) Hua Tan et al.   EBioMedicine

Integrative analysis of DNA methylation and gene expression profiles identifies MIR4435-2HG as an oncogenic lncRNA for glioma progression

(2019) Zhijin Li et al.   GENE

Long noncoding RNA PVT1 inhibits interferon-α mediated therapy for hepatocellular carcinoma cells by interacting with signal transducer and activator of transcription 1

(2018) Hongda Ding et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

lncRNA Epigenetic Landscape Analysis Identifies EPIC1 as an Oncogenic lncRNA that Interacts with MYC and Promotes Cell-Cycle Progression in Cancer

(2018) Zehua Wang et al.   CANCER CELL

Promoter of lncRNA Gene PVT1 Is a Tumor-Suppressor DNA Boundary Element

(2018) Seung Woo Cho et al.   CELL

LncRNA PVT1 promotes angiogenesis via activating the STAT3/VEGFA axis in gastric cancer

(2018) Jing Zhao et al.   ONCOGENE

Long non-coding RNAs AC026904.1 and UCA1: a “one-two punch” for TGF-β-induced SNAI2 activation and epithelial-mesenchymal transition in breast cancer

(2018) Guo-Yin Li et al.   Theranostics

Epigenetic Biomarkers of Promoter DNA Methylation in the New Era of Cancer Treatment

(2018) Keishi Yamashita et al.   CANCER SCIENCE

Role of gene body methylation in acclimatization and adaptation in a basal metazoan

(2018) Groves Dixon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biomarkers in colorectal cancer: Current clinical utility and future perspectives

(2018) Marco Vacante et al.   World Journal of Clinical Cases

DNA methylation aberrancies as a guide for surveillance and treatment of human cancers

(2017) Gangning Liang et al.   Epigenetics

A novel HER2 gene body enhancer contributes to HER2 expression

(2017) Q Liu et al.   ONCOGENE

SMARCE1 is required for the invasive progression of in situ cancers

(2017) Ethan S. Sokol et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Non-coding RNAs participate in the regulatory network of CLDN4 via ceRNA mediated miRNA evasion

(2017) Yong-xi Song et al.   Nature Communications

Non-coding RNAs in Development and Disease: Background, Mechanisms, and Therapeutic Approaches

(2016) Julia Beermann et al.   PHYSIOLOGICAL REVIEWS

DNA methylation in the gene body influences MeCP2-mediated gene repression

(2016) Benyam Kinde et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global Cancer Incidence and Mortality Rates and Trends--An Update

(2015) L. A. Torre et al.   CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION

SMARCE1 suppresses EGFR expression and controls responses to MET and ALK inhibitors in lung cancer

(2015) Andreas I Papadakis et al.   CELL RESEARCH

LncRNA Dum interacts with Dnmts to regulate Dppa2 expression during myogenic differentiation and muscle regeneration

(2015) Lijun Wang et al.   CELL RESEARCH

The alternative role of DNA methylation in splicing regulation

(2015) Galit Lev Maor et al.   TRENDS IN GENETICS

Genome-wide mutational spectra analysis reveals significant cancer-specific heterogeneity

(2015) Hua Tan et al.   Scientific Reports

The Molecular Signatures Database Hallmark Gene Set Collection

(2015) Arthur Liberzon et al.   Cell Systems

Gene Body Methylation Can Alter Gene Expression and Is a Therapeutic Target in Cancer

(2014) Xiaojing Yang et al.   CANCER CELL

Unambiguous Identification of miRNA:Target Site Interactions by Different Types of Ligation Reactions

(2014) Stefanie Grosswendt et al.   MOLECULAR CELL

Advances in the profiling of DNA modifications: cytosine methylation and beyond

(2014) Nongluk Plongthongkum et al.   NATURE REVIEWS GENETICS

Antisense transcription at the TRPM2 locus as a novel prognostic marker and therapeutic target in prostate cancer

(2014) U Orfanelli et al.   ONCOGENE

Genetic and epigenetic biomarkers for diagnosis, prognosis and treatment of colorectal cancer

(2014) Fabio Coppedè   WORLD JOURNAL OF GASTROENTEROLOGY

Prospective evaluation of methylatedSEPT9in plasma for detection of asymptomatic colorectal cancer

(2013) Timothy Robert Church et al.   GUT

Long RNAs wire up cancer growth

(2013) Adam M. Schmitt et al.   NATURE

DNA methylation: roles in mammalian development

(2013) Zachary D. Smith et al.   NATURE REVIEWS GENETICS

starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data

(2013) Jun-Hao Li et al.   NUCLEIC ACIDS RESEARCH

Long noncoding RNAs: fresh perspectives into the RNA world

(2013) Lin Yang et al.   TRENDS IN BIOCHEMICAL SCIENCES

Landscape of transcription in human cells

(2012) Sarah Djebali et al.   NATURE

Emerging functional and mechanistic paradigms of mammalian long non-coding RNAs

(2012) V. A. Moran et al.   NUCLEIC ACIDS RESEARCH

Molecular Mechanisms of Long Noncoding RNAs

(2011) Kevin C. Wang et al.   MOLECULAR CELL

A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression

(2011) Kevin C. Wang et al.   NATURE

Relationship between Gene Body DNA Methylation and Intragenic H3K9me3 and H3K36me3 Chromatin Marks

(2011) Maria A. Hahn et al.   PLoS One

starBase: a database for exploring microRNA–mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data

(2010) Jian-Hua Yang et al.   NUCLEIC ACIDS RESEARCH

Identification of novel sense and antisense transcription at the TRPM2 locus in cancer

(2008) Ugo Orfanelli et al.   CELL RESEARCH