The molecular basis of endolytic activity of a multidomain alginate lyase from Defluviitalea phaphyphila, a representative of a new lyase family, PL39

Structural and biochemical characterization of a multidomain alginate lyase reveals a novel role of CBM32 in CAZymes

(2018) Qianqian Lyu et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Substitution of one calcium-binding amino acid strengthens substrate binding in a thermophilic alginate lyase

(2018) Bing Wang et al.   FEBS LETTERS

MolProbity: More and better reference data for improved all-atom structure validation

(2017) Christopher J. Williams et al.   PROTEIN SCIENCE

Strategies for carbohydrate model building, refinement and validation

(2017) Jon Agirre   Acta Crystallographica Section D-Structural Biology

Functional and Structural Studies of a Multidomain Alginate Lyase from Persicobacter sp. CCB-QB2

(2017) Pei-Fang Sim et al.   Scientific Reports

Direct bioconversion of brown algae into ethanol by thermophilic bacterium Defluviitalea phaphyphila

(2016) Shi-Qi Ji et al.   Biotechnology for Biofuels

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Dali server update

(2016) Liisa Holm et al.   NUCLEIC ACIDS RESEARCH

Novel Alginate Lyase (Aly5) from a Polysaccharide-Degrading Marine Bacterium, Flammeovirga sp. Strain MY04: Effects of Module Truncation on Biochemical Characteristics, Alginate Degradation Patterns, and Oligosaccharide-Yielding Properties

(2015) Wenjun Han et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Defluviitalea phaphyphila sp. nov., a Novel Thermophilic Bacterium That Degrades Brown Algae

(2015) Shi-Qi Ji et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Family 13 carbohydrate-binding module of alginate lyase from Agarivorans sp. L11 enhances its catalytic efficiency and thermostability, and alters its substrate preference and product distribution

(2015) Shangyong Li et al.   FEMS MICROBIOLOGY LETTERS

Structural, physicochemical and antioxidant properties of sodium alginate isolated from a Tunisian brown seaweed

(2015) Sabrine Sellimi et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Privateer: software for the conformational validation of carbohydrate structures

(2015) Jon Agirre et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Privateer: software for the conformational validation of carbohydrate structures

(2015) Jon Agirre et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Synergism of Glycoside Hydrolase Secretomes from Two Thermophilic Bacteria Cocultivated on Lignocellulose

(2014) Kundi Zhang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Uronic polysaccharide degrading enzymes

(2014) Marie-Line Garron et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Structure of a PL17 Family Alginate Lyase Demonstrates Functional Similarities among Exotype Depolymerases

(2014) David Park et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Comparative Characterization of Two Marine Alginate Lyases fromZobellia galactanivoransReveals Distinct Modes of Action and Exquisite Adaptation to Their Natural Substrate

(2013) François Thomas et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Efficient ethanol production from brown macroalgae sugars by a synthetic yeast platform

(2013) Maria Enquist-Newman et al.   NATURE

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

An Engineered Microbial Platform for Direct Biofuel Production from Brown Macroalgae

(2012) A. J. Wargacki et al.   SCIENCE

REFMAC5 for the refinement of macromolecular crystal structures

(2011) Garib N. Murshudov et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Alginate: Properties and biomedical applications

(2011) Kuen Yong Lee et al.   PROGRESS IN POLYMER SCIENCE

XDS

(2010) Wolfgang Kabsch   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Structural and mechanistic classification of uronic acid-containing polysaccharide lyases

(2010) M.-L. Garron et al.   GLYCOBIOLOGY

Using marine macroalgae for carbon sequestration: a critical appraisal

(2010) Ik Kyo Chung et al.   JOURNAL OF APPLIED PHYCOLOGY

Catalytic Mechanism of Heparinase II Investigated by Site-directed Mutagenesis and the Crystal Structure with Its Substrate

(2010) David Shaya et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Crystal Structure of Exotype Alginate Lyase Atu3025 fromAgrobacterium tumefaciens

(2010) Akihito Ochiai et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

xia2: an expert system for macromolecular crystallography data reduction

(2009) G. Winter   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Substrate recognition by family 7 alginate lyase from Sphingomonas sp. A1

(2008) Kohei Ogura et al.   JOURNAL OF MOLECULAR BIOLOGY