MolProbity: More and better reference data for improved all-atom structure validation

Molprobity's ultimate rotamer-library distributions for model validation

(2016) Bradley J. Hintze et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

NGL Viewer: a web application for molecular visualization

(2015) Alexander S. Rose et al.   NUCLEIC ACIDS RESEARCH

Conformation-dependent backbone geometry restraints set a new standard for protein crystallographic refinement

(2014) Nigel W. Moriarty et al.   FEBS Journal

New tools provide a second look at HDV ribozyme structure, dynamics and cleavage

(2014) Gary J. Kapral et al.   NUCLEIC ACIDS RESEARCH

Advances, Interactions, and Future Developments in the CNS, Phenix, and Rosetta Structural Biology Software Systems

(2013) Paul D. Adams et al.   Annual Review of Biophysics

Crystallographic model validation: from diagnosis to healing

(2013) Jane S Richardson et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Proton transfer reactions and hydrogen-bond networks in protein environments

(2013) H. Ishikita et al.   Journal of the Royal Society Interface

Recommendations of the wwPDB NMR Validation Task Force

(2013) Gaetano T. Montelione et al.   STRUCTURE

Graphical tools for macromolecular crystallography inPHENIX

(2012) Nathaniel Echols et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Correcting pervasive errors in RNA crystallography through enumerative structure prediction

(2012) Fang-Chieh Chou et al.   NATURE METHODS

Nonplanar peptide bonds in proteins are common and conserved but not biased toward active sites

(2011) D. S. Berkholz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A New Generation of Crystallographic Validation Tools for the Protein Data Bank

(2011) Randy J. Read et al.   STRUCTURE

Crystallography Open Database – an open-access collection of crystal structures

(2009) Saulius Gražulis et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Discrimination between Closely Related Cellular Metabolites by the SAM-I Riboswitch

(2009) Rebecca K. Montange et al.   JOURNAL OF MOLECULAR BIOLOGY

KING (Kinemage, Next Generation): A versatile interactive molecular and scientific visualization program

(2009) Vincent B. Chen et al.   PROTEIN SCIENCE

The other 90% of the protein: Assessment beyond the Cαs for CASP8 template-based and high-accuracy models

(2009) Daniel A. Keedy et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Conformation Dependence of Backbone Geometry in Proteins

(2009) Donald S. Berkholz et al.   STRUCTURE

RNA backbone: Consensus all-angle conformers and modular string nomenclature (an RNA Ontology Consortium contribution)

(2008) J. S. Richardson et al.   RNA