Secondary Structural Model of Human MALAT1 Reveals Multiple Structure–Function Relationships
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Secondary Structural Model of Human MALAT1 Reveals Multiple Structure–Function Relationships
Authors
Keywords
-
Journal
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 20, Issue 22, Pages 5610
Publisher
MDPI AG
Online
2019-11-12
DOI
10.3390/ijms20225610
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Phylogenetic Analysis with Improved Parameters Reveals Conservation in lncRNA Structures
- (2019) Rafael C.A. Tavares et al. JOURNAL OF MOLECULAR BIOLOGY
- Transcriptome-wide Mapping of Internal N7-Methylguanosine Methylome in Mammalian mRNA
- (2019) Li-Sheng Zhang et al. MOLECULAR CELL
- Long non-coding RNA Malat1 activated autophagy, hence promoting cell proliferation and inhibiting apoptosis by sponging miR-101 in colorectal cancer
- (2019) Yaoran Si et al. CELLULAR & MOLECULAR BIOLOGY LETTERS
- MALAT1: a druggable long non-coding RNA for targeted anti-cancer approaches
- (2018) Nicola Amodio et al. Journal of Hematology & Oncology
- HyPR-MS for multiplexed discovery of MALAT1, NEAT1, and NORAD lncRNA protein interactomes
- (2018) Michele Spiniello et al. JOURNAL OF PROTEOME RESEARCH
- Towards a complete map of the human long non-coding RNA transcriptome
- (2018) Barbara Uszczynska-Ratajczak et al. NATURE REVIEWS GENETICS
- Structural analyses of NEAT1 lncRNAs suggest long-range RNA interactions that may contribute to paraspeckle architecture
- (2018) Yizhu Lin et al. NUCLEIC ACIDS RESEARCH
- The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
- (2018) Enis Afgan et al. NUCLEIC ACIDS RESEARCH
- miR-205 regulates the proliferation and invasion of ovarian cancer cells via suppressing PTEN/SMAD4 expression
- (2018) Ping Chu et al. Oncology Letters
- A potentially abundant junctional RNA motif stabilized by m6A and Mg2+
- (2018) Bei Liu et al. Nature Communications
- A myriad of roles of miR-25 in health and disease
- (2018) Márta Sárközy et al. Oncotarget
- Long Non-coding RNA Structure and Function: Is There a Link?
- (2018) Anna Zampetaki et al. Frontiers in Physiology
- The long noncoding RNA MALAT-1 functions as a competing endogenous RNA to regulate MSL2 expression by sponging miR-338-3p in myasthenia gravis
- (2018) Xiaotong Kong et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- miRBase: from microRNA sequences to function
- (2018) Ana Kozomara et al. NUCLEIC ACIDS RESEARCH
- mRNAs and lncRNAs intrinsically form secondary structures with short end-to-end distances
- (2018) Wan-Jung C. Lai et al. Nature Communications
- The Dark Side of the Epitranscriptome: Chemical Modifications in Long Non-Coding RNAs
- (2017) Roland Jacob et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Long noncoding RNA MALAT1 regulates autophagy associated chemoresistance via miR-23b-3p sequestration in gastric cancer
- (2017) Hu YiRen et al. Molecular Cancer
- The m1A landscape on cytosolic and mitochondrial mRNA at single-base resolution
- (2017) Modi Safra et al. NATURE
- Nm-seq maps 2′-O-methylation sites in human mRNA with base precision
- (2017) Qing Dai et al. NATURE METHODS
- Quantitative proteomics reveals that long non-coding RNA MALAT1 interacts with DBC1 to regulate p53 acetylation
- (2017) Ruibing Chen et al. NUCLEIC ACIDS RESEARCH
- N 6-methyladenosine alters RNA structure to regulate binding of a low-complexity protein
- (2017) Nian Liu et al. NUCLEIC ACIDS RESEARCH
- m6AVar: a database of functional variants involved in m6A modification
- (2017) Yueyuan Zheng et al. NUCLEIC ACIDS RESEARCH
- Upregulated exosomic miR-23b-3p plays regulatory roles in the progression of pancreatic cancer
- (2017) Dayang Chen et al. ONCOLOGY REPORTS
- MALAT1/miR-101-3p/MCL1 axis mediates cisplatin resistance in lung cancer
- (2017) Huaqi Wang et al. Oncotarget
- Long noncoding RNA MALAT1 promotes cell proliferation through suppressing miR-205 and promoting SMAD4 expression in osteosarcoma
- (2017) Qingbo Li et al. Oncotarget
- RNAStructuromeDB: A genome-wide database for RNA structural inference
- (2017) Ryan J. Andrews et al. Scientific Reports
- Identification and Characterization of a Class of MALAT1 -like Genomic Loci
- (2017) Bin Zhang et al. Cell Reports
- The lncRNA MALAT1 acts as a competing endogenous RNA to regulate KRAS expression by sponging miR-217 in pancreatic ductal adenocarcinoma
- (2017) Pingping Liu et al. Scientific Reports
- Modulated Expression of Specific tRNAs Drives Gene Expression and Cancer Progression
- (2016) Hani Goodarzi et al. CELL
- RNA Duplex Map in Living Cells Reveals Higher-Order Transcriptome Structure
- (2016) Zhipeng Lu et al. CELL
- The lncRNA MALAT1 functions as a competing endogenous RNA to regulate MCL-1 expression by sponging miR-363-3p in gallbladder cancer
- (2016) Shou-Hua Wang et al. JOURNAL OF CELLULAR AND MOLECULAR MEDICINE
- Physiological functions and pathobiology of TDP-43 and FUS/TLS proteins
- (2016) Antonia Ratti et al. JOURNAL OF NEUROCHEMISTRY
- In Vivo Mapping of Eukaryotic RNA Interactomes Reveals Principles of Higher-Order Organization and Regulation
- (2016) Jong Ghut Ashley Aw et al. MOLECULAR CELL
- A statistical test for conserved RNA structure shows lack of evidence for structure in lncRNAs
- (2016) Elena Rivas et al. NATURE METHODS
- Toward a Shared Vision for Cancer Genomic Data
- (2016) Robert L. Grossman et al. NEW ENGLAND JOURNAL OF MEDICINE
- Methyltransferase-like protein 16 binds the 3′-terminal triple helix of MALAT1 long noncoding RNA
- (2016) Jessica A. Brown et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- RBM24 suppresses cancer progression by upregulating miR-25 to target MALAT1 in nasopharyngeal carcinoma
- (2016) Wen-Feng Hua et al. Cell Death & Disease
- Up-Regulation of Plasma miR-23b is Associated with Poor Prognosis of Gastric Cancer
- (2016) Kun Zhuang et al. MEDICAL SCIENCE MONITOR
- Regulation of MALAT1 expression by TDP43 controls the migration and invasion of non-small cell lung cancer cells in vitro
- (2015) Fengjie Guo et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Long Noncoding RNA MALAT1 Promotes Aggressive Renal Cell Carcinoma through Ezh2 and Interacts with miR-205
- (2015) H. Hirata et al. CANCER RESEARCH
- Differentiation of mammary tumors and reduction in metastasis uponMalat1lncRNA loss
- (2015) Gayatri Arun et al. GENES & DEVELOPMENT
- HOTAIR Forms an Intricate and Modular Secondary Structure
- (2015) Srinivas Somarowthu et al. MOLECULAR CELL
- N6-methyladenosine-dependent RNA structural switches regulate RNA–protein interactions
- (2015) Nian Liu et al. NATURE
- Single-nucleotide-resolution mapping of m6A and m6Am throughout the transcriptome
- (2015) Bastian Linder et al. NATURE METHODS
- Probing Xist RNA Structure in Cells Using Targeted Structure-Seq
- (2015) Rui Fang et al. PLoS Genetics
- RNA-RNA Interactions Enable Specific Targeting of Noncoding RNAs to Nascent Pre-mRNAs and Chromatin Sites
- (2014) Jesse M. Engreitz et al. CELL
- Silencing of Long Noncoding RNA MALAT1 by miR-101 and miR-217 Inhibits Proliferation, Migration, and Invasion of Esophageal Squamous Cell Carcinoma Cells
- (2014) Xinyu Wang et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- The Long Noncoding RNAs NEAT1 and MALAT1 Bind Active Chromatin Sites
- (2014) Jason A. West et al. MOLECULAR CELL
- Landscape and variation of RNA secondary structure across the human transcriptome
- (2014) Yue Wan et al. NATURE
- Structural insights into the stabilization of MALAT1 noncoding RNA by a bipartite triple helix
- (2014) Jessica A Brown et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Infernal 1.1: 100-fold faster RNA homology searches
- (2013) E. P. Nawrocki et al. BIOINFORMATICS
- Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo
- (2013) Silvi Rouskin et al. NATURE
- starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data
- (2013) Jun-Hao Li et al. NUCLEIC ACIDS RESEARCH
- Widespread purifying selection on RNA structure in mammals
- (2013) Martin A. Smith et al. NUCLEIC ACIDS RESEARCH
- Probing N6-methyladenosine RNA modification status at single nucleotide resolution in mRNA and long noncoding RNA
- (2013) N. Liu et al. RNA
- microRNA-9 targets the long non-coding RNA MALAT1 for degradation in the nucleus
- (2013) Eleonora Leucci et al. Scientific Reports
- The Noncoding RNA MALAT1 Is a Critical Regulator of the Metastasis Phenotype of Lung Cancer Cells
- (2012) T. Gutschner et al. CANCER RESEARCH
- SAVoR: a server for sequencing annotation and visualization of RNA structures
- (2012) F. Li et al. NUCLEIC ACIDS RESEARCH
- Structural architecture of the human long non-coding RNA, steroid receptor RNA activator
- (2012) Irina V. Novikova et al. NUCLEIC ACIDS RESEARCH
- Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA
- (2012) Jeffrey E. Squires et al. NUCLEIC ACIDS RESEARCH
- ViennaRNA Package 2.0
- (2011) Ronny Lorenz et al. Algorithms for Molecular Biology
- R2R - software to speed the depiction of aesthetic consensus RNA secondary structures
- (2011) Zasha Weinberg et al. BMC BIOINFORMATICS
- Conserved Function of lincRNAs in Vertebrate Embryonic Development despite Rapid Sequence Evolution
- (2011) Igor Ulitsky et al. CELL
- Integrative Regulatory Mapping Indicates that the RNA-Binding Protein HuR Couples Pre-mRNA Processing and mRNA Stability
- (2011) Neelanjan Mukherjee et al. MOLECULAR CELL
- Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
- (2011) F. Sievers et al. Molecular Systems Biology
- The Nuclear-Retained Noncoding RNA MALAT1 Regulates Alternative Splicing by Modulating SR Splicing Factor Phosphorylation
- (2010) Vidisha Tripathi et al. MOLECULAR CELL
- VARNA: Interactive drawing and editing of the RNA secondary structure
- (2009) Kévin Darty et al. BIOINFORMATICS
- Jalview Version 2--a multiple sequence alignment editor and analysis workbench
- (2009) A. M. Waterhouse et al. BIOINFORMATICS
- NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
- (2009) Douglas H. Turner et al. NUCLEIC ACIDS RESEARCH
- 3′ End Processing of a Long Nuclear-Retained Noncoding RNA Yields a tRNA-like Cytoplasmic RNA
- (2008) Jeremy E. Wilusz et al. CELL
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started