The multiple evolutionary origins of the eukaryotic N-glycosylation pathway

Archaeal ancestors of eukaryotes: not so elusive any more

(2015) Eugene V. Koonin   BMC BIOLOGY

Complex archaea that bridge the gap between prokaryotes and eukaryotes

(2015) Anja Spang et al.   NATURE

eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences

(2015) Jaime Huerta-Cepas et al.   NUCLEIC ACIDS RESEARCH

HMMER web server: 2015 update

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

N-Linked Glycans Are Assembled on Highly Reduced Dolichol Phosphate Carriers in the Hyperthermophilic Archaea Pyrococcus furiosus

(2015) Michelle M. Chang et al.   PLoS One

The two-domain tree of life is linked to a new root for the Archaea

(2015) Kasie Raymann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The universal tree of life: an update

(2015) Patrick Forterre   Frontiers in Microbiology

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

An inside-out origin for the eukaryotic cell

(2014) David A Baum et al.   BMC BIOLOGY

Rooting the Domain Archaea by Phylogenomic Analysis Supports the Foundation of the New Kingdom Proteoarchaeota

(2014) Céline Petitjean et al.   Genome Biology and Evolution

N-Linked Glycosylation in Archaea: a Structural, Functional, and Genetic Analysis

(2014) Ken F. Jarrell et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The hybrid nature of the Eukaryota and a consilient view of life on Earth

(2014) James O. McInerney et al.   NATURE REVIEWS MICROBIOLOGY

The OMA orthology database in 2015: function predictions, better plant support, synteny view and other improvements

(2014) Adrian M. Altenhoff et al.   NUCLEIC ACIDS RESEARCH

AglB, catalyzing the oligosaccharyl transferase step of the archaealN-glycosylation process, is essential in the thermoacidophilic crenarchaeonSulfolobus acidocaldarius

(2014) Benjamin H. Meyer et al.   MicrobiologyOpen

Wall Teichoic Acids of Gram-Positive Bacteria

(2013) Stephanie Brown et al.   Annual Review of Microbiology

Hot and sweet: protein glycosylation in Crenarchaeota

(2013) Benjamin H. Meyer et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Protein O-mannosylation: What we have learned from baker's yeast

(2013) Martin Loibl et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Agl16, a Thermophilic Glycosyltransferase Mediating the Last Step of N-Glycan Biosynthesis in the Thermoacidophilic Crenarchaeon Sulfolobus acidocaldarius

(2013) B. H. Meyer et al.   JOURNAL OF BACTERIOLOGY

Glycoprotein Biosynthesis in a Eukaryote Lacking the Membrane Protein Rft1

(2013) Jennifer Jelk et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Phylogenetic- and genome-derived insight into the evolution of N-glycosylation in Archaea

(2013) Lina Kaminski et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Biochemical evidence for an alternate pathway in N-linked glycoprotein biosynthesis

(2013) Angelyn Larkin et al.   Nature Chemical Biology

Extreme sweetness: protein glycosylation in archaea

(2013) Jerry Eichler   NATURE REVIEWS MICROBIOLOGY

Crystal structures of an archaeal oligosaccharyltransferase provide insights into the catalytic cycle of N-linked protein glycosylation

(2013) S. Matsumoto et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Two Distinct N-Glycosylation Pathways Process the Haloferax volcanii S-Layer Glycoprotein upon Changes in Environmental Salinity

(2013) L. Kaminski et al.   mBio

Complicated N-linked glycans in simple organisms

(2012) Birgit Schiller et al.   BIOLOGICAL CHEMISTRY

AglS, a Novel Component of the Haloferax volcanii N-Glycosylation Pathway, Is a Dolichol Phosphate-Mannose Mannosyltransferase

(2012) C. Cohen-Rosenzweig et al.   JOURNAL OF BACTERIOLOGY

Modeling Protein Evolution with Several Amino Acid Replacement Matrices Depending on Site Rates

(2012) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION

A congruent phylogenomic signal places eukaryotes within the Archaea

(2012) T. A. Williams et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

The thermoacidophilic archaeon Sulfolobus acidocaldarius contains an unsually short, highly reduced dolichyl phosphate

(2011) Ziqiang Guan et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS

Mechanisms and principles of N-linked protein glycosylation

(2011) Flavio Schwarz et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Alg14 organizes the formation of a multiglycosyltransferase complex involved in initiation of lipid-linked oligosaccharide biosynthesis

(2011) J. Lu et al.   GLYCOBIOLOGY

Sulfoquinovose synthase - an important enzyme in the N-glycosylation pathway of Sulfolobus acidocaldarius

(2011) Benjamin H. Meyer et al.   MOLECULAR MICROBIOLOGY

The archaeal cell envelope

(2011) Sonja-Verena Albers et al.   NATURE REVIEWS MICROBIOLOGY

The archaeal ‘TACK’ superphylum and the origin of eukaryotes

(2011) Lionel Guy et al.   TRENDS IN MICROBIOLOGY

Protein tyrosine O-glycosylation--A rather unexplored prokaryotic glycosylation system

(2010) K. Zarschler et al.   GLYCOBIOLOGY

Characterization of N-Linked Protein Glycosylation in Helicobacter pullorum

(2010) A. J. Jervis et al.   JOURNAL OF BACTERIOLOGY

Distinct glycan-charged phosphodolichol carriers are required for the assembly of the pentasaccharide N-linked to the Haloferax volcanii S-layer glycoprotein

(2010) Ziqiang Guan et al.   MOLECULAR MICROBIOLOGY

Protein glycosylation in bacteria: sweeter than ever

(2010) Harald Nothaft et al.   NATURE REVIEWS MICROBIOLOGY

The origin of eukaryotes and their relationship with the Archaea: are we at a phylogenomic impasse?

(2010) Simonetta Gribaldo et al.   NATURE REVIEWS MICROBIOLOGY

GUIDANCE: a web server for assessing alignment confidence scores

(2010) O. Penn et al.   NUCLEIC ACIDS RESEARCH

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Intermediate Steps

(2010) D. P. Devos et al.   SCIENCE

Glycosyltransferases and oligosaccharyltransferases in Archaea: putative components of theN-glycosylation pathway in the third domain of life

(2009) Hilla Magidovich et al.   FEMS MICROBIOLOGY LETTERS

Hetero-oligomeric interactions between early glycosyltransferases of the dolichol cycle

(2009) C. Noffz et al.   GLYCOBIOLOGY

Protein O-mannosylation: Conserved from bacteria to humans

(2009) M. Lommel et al.   GLYCOBIOLOGY

Comparative Structural Biology of Eubacterial and Archaeal Oligosaccharyltransferases

(2009) Nobuo Maita et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Suppression of Rft1 Expression Does Not Impair the Transbilayer Movement of Man5GlcNAc2-P-P-Dolichol in Sealed Microsomes from Yeast

(2009) Jeffrey S. Rush et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Identification of genes involved in the assembly and attachment of a novel flagellinN-linked tetrasaccharide important for motility in the archaeonMethanococcus maripaludis

(2009) David J. VanDyke et al.   MOLECULAR MICROBIOLOGY

A Complex Cell Division Machinery Was Present in the Last Common Ancestor of Eukaryotes

(2009) Laura Eme et al.   PLoS One

Broad spectrum O-linked protein glycosylation in the human pathogen Neisseria gonorrhoeae

(2009) A. Vik et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dolichol-phosphate mannose synthase: Structure, function and regulation

(2008) Yusuke Maeda et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

S-layer nanoglycobiology of bacteria

(2008) Paul Messner et al.   CARBOHYDRATE RESEARCH

Identification of the Archaeal alg7 Gene Homolog (Encoding N-Acetylglucosamine-1-Phosphate Transferase) of the N-Linked Glycosylation System by Cross-Domain Complementation in Saccharomyces cerevisiae

(2008) H. Shams-Eldin et al.   JOURNAL OF BACTERIOLOGY

The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis

(2008) Frank-Jörg Vorhölter et al.   JOURNAL OF BIOTECHNOLOGY

An Improved General Amino Acid Replacement Matrix

(2008) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION

Does Rft1 flip an N-glycan lipid precursor?

(2008) Christian G. Frank et al.   NATURE

The archaebacterial origin of eukaryotes

(2008) C. J. Cox et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Glycosyltransferases: Structures, Functions, and Mechanisms

(2007) L.L. Lairson et al.   Annual Review of Biochemistry