Development of a multi-assay approach for monitoring coral diversity using eDNA metabarcoding

Elevated Symbiodiniaceae richness at Atauro Island (Timor-Leste): a highly biodiverse reef system

(2019) Joshua I. Brian et al.   CORAL REEFS

Sponges as natural environmental DNA samplers

(2019) Stefano Mariani et al.   CURRENT BIOLOGY

Exploring deep-water coral communities using environmental DNA

(2018) Meredith V. Everett et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Metagenomic sequencing of environmental DNA reveals marine faunal assemblages from the West Antarctic Peninsula

(2018) Dominique A. Cowart et al.   Marine Genomics

Biodiversity of the Great Barrier Reef—how adequately is it protected?

(2018) Zoe T. Richards et al.   PeerJ

Environmental DNA illuminates the dark diversity of sharks

(2018) Germain Boussarie et al.   Science Advances

Coral reef structural complexity provides important coastal protection from waves under rising sea levels

(2018) Daniel L. Harris et al.   Science Advances

The value of environmental DNA biobanking for long-term biomonitoring

(2018) Simon N. Jarman et al.   Nature Ecology & Evolution

Environmental DNA metabarcoding studies are critically affected by substrate selection

(2018) Adam Koziol et al.   Molecular Ecology Resources

International Barcode of Life: Focus on big biodiversity in South Africa

(2017) Sarah J. Adamowicz et al.   GENOME

Global warming and recurrent mass bleaching of corals

(2017) Terry P. Hughes et al.   NATURE

Algorithm for post-clustering curation of DNA amplicon data yields reliable biodiversity estimates

(2017) Tobias Guldberg Frøslev et al.   Nature Communications

Ecosystem biomonitoring with eDNA: metabarcoding across the tree of life in a tropical marine environment

(2017) Michael Stat et al.   Scientific Reports

DNA metabarcoding for diet analysis and biodiversity: A case study using the endangered Australian sea lion (Neophoca cinerea )

(2017) Tina E. Berry et al.   Ecology and Evolution

Early detection of invasive species in marine ecosystems using high-throughput sequencing: technical challenges and possible solutions

(2016) Wei Xiong et al.   MARINE BIOLOGY

Please mind the gap – Visual census and cryptic biodiversity assessment at central Red Sea coral reefs

(2016) John K. Pearman et al.   MARINE ENVIRONMENTAL RESEARCH

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data

(2016) Daniel H. Huson et al.   PLoS Computational Biology

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Population characteristics of a large whale shark aggregation inferred from seawater environmental DNA

(2016) Eva Egelyng Sigsgaard et al.   Nature Ecology & Evolution

Evaluating the economic damage of climate change on global coral reefs

(2015) Ping-Yu Chen et al.   GLOBAL ENVIRONMENTAL CHANGE-HUMAN AND POLICY DIMENSIONS

Thresholds in Caribbean coral reefs: implications for ecosystem-based fishery management

(2015) Kendra A. Karr et al.   JOURNAL OF APPLIED ECOLOGY

eDNA and specific primers for early detection of invasive species – A case study on the bivalve Rangia cuneata, currently spreading in Europe

(2015) Alba Ardura et al.   MARINE ENVIRONMENTAL RESEARCH

Assessing vertebrate biodiversity in a kelp forest ecosystem using environmental DNA

(2015) Jesse A. Port et al.   MOLECULAR ECOLOGY

Predicting climate-driven regime shifts versus rebound potential in coral reefs

(2015) Nicholas A. J. Graham et al.   NATURE

Fifteen forms of biodiversity trend in the Anthropocene

(2015) Brian J. McGill et al.   TRENDS IN ECOLOGY & EVOLUTION

Projecting Global Biodiversity Indicators under Future Development Scenarios

(2015) Piero Visconti et al.   Conservation Letters

Divergence thresholds and divergent biodiversity estimates: can metabarcoding reliably describe zooplankton communities?

(2015) Emily A. Brown et al.   Ecology and Evolution

Enhanced susceptibility to predation in corals of compromised condition

(2015) Allan J. Bright et al.   PeerJ

Deep-Sea, Deep-Sequencing: Metabarcoding Extracellular DNA from Sediments of Marine Canyons

(2015) Magdalena Guardiola et al.   PLoS One

Clustered parrotfish feeding scars trigger partial coral mortality of massive Porites colonies on the inshore Great Barrier Reef

(2014) J. Q. Welsh et al.   CORAL REEFS

Assemblage Time Series Reveal Biodiversity Change but Not Systematic Loss

(2014) M. Dornelas et al.   SCIENCE

Environmental monitoring using next generation sequencing: rapid identification of macroinvertebrate bioindicator species

(2013) Melissa E Carew et al.   Frontiers in Zoology

Climate change impedes scleractinian corals as primary reef ecosystem engineers

(2013) Christian Wild et al.   MARINE AND FRESHWATER RESEARCH

Next-generation sequencing technologies for environmental DNA research

(2012) SHADI SHOKRALLA et al.   MOLECULAR ECOLOGY

Detection of a Diverse Marine Fish Fauna Using Environmental DNA from Seawater Samples

(2012) Philip Francis Thomsen et al.   PLoS One

Who is eating what: diet assessment using next generation sequencing

(2011) FRANCOIS POMPANON et al.   MOLECULAR ECOLOGY

Integrating DNA barcode data and taxonomic practice: Determination, discovery, and description

(2010) Paul Z. Goldstein et al.   BIOESSAYS

Increased seawater temperature and decreased dissolved oxygen triggers fish kill at the Cocos (Keeling) Islands, Indian Ocean

(2010) J.-P. A. Hobbs et al.   JOURNAL OF FISH BIOLOGY

One-Third of Reef-Building Corals Face Elevated Extinction Risk from Climate Change and Local Impacts

(2008) K. E. Carpenter et al.   SCIENCE

A Global Map of Human Impact on Marine Ecosystems

(2008) Benjamin S. Halpern et al.   SCIENCE