LEVER: software tools for segmentation, tracking and lineaging of proliferating cells

CellProfiler Tracer: exploring and validating high-throughput, time-lapse microscopy image data

(2015) Mark-Anthony Bray et al.   BMC BIOINFORMATICS

Computational Image Analysis Reveals Intrinsic Multigenerational Differences between Anterior and Posterior Cerebral Cortex Neural Progenitor Cells

(2015) Mark R. Winter et al.   Stem Cell Reports

Visualization and correction of automated segmentation, tracking and lineaging from 5-D stem cell image sequences

(2014) Eric Wait et al.   BMC BIOINFORMATICS

Extracting meaning from biological imaging data

(2014) Andrew R. Cohen   MOLECULAR BIOLOGY OF THE CELL

Objective comparison of particle tracking methods

(2014) Nicolas Chenouard et al.   NATURE METHODS

Fast, accurate reconstruction of cell lineages from large-scale fluorescence microscopy data

(2014) Fernando Amat et al.   NATURE METHODS

Icy: an open bioimage informatics platform for extended reproducible research

(2012) Fabrice de Chaumont et al.   NATURE METHODS

Vertebrate neural stem cell segmentation, tracking and lineaging with validation and editing

(2011) Mark Winter et al.   Nature Protocols

Metadata matters: access to image data in the real world

(2010) Melissa Linkert et al.   JOURNAL OF CELL BIOLOGY