Every transcription factor deserves its map: Scaling up epitope tagging of proteins to bypass antibody problems
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Every transcription factor deserves its map: Scaling up epitope tagging of proteins to bypass antibody problems
Authors
Keywords
-
Journal
BIOESSAYS
Volume 38, Issue 8, Pages 801-811
Publisher
Wiley
Online
2016-06-17
DOI
10.1002/bies.201600028
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- High-Throughput, High-Resolution Mapping of Protein Localization in Mammalian Brain by In Vivo Genome Editing
- (2016) Takayasu Mikuni et al. CELL
- Parkinson-associated risk variant in distal enhancer of α-synuclein modulates target gene expression
- (2016) Frank Soldner et al. NATURE
- CRISPR knockout screening outperforms shRNA and CRISPRi in identifying essential genes
- (2016) Bastiaan Evers et al. NATURE BIOTECHNOLOGY
- High-throughput mapping of regulatory DNA
- (2016) Nisha Rajagopal et al. NATURE BIOTECHNOLOGY
- Functional genetic screens for enhancer elements in the human genome using CRISPR-Cas9
- (2016) Gozde Korkmaz et al. NATURE BIOTECHNOLOGY
- Overview of the roles of Sox2 in stem cell and development
- (2015) Ruopeng Feng et al. BIOLOGICAL CHEMISTRY
- An evolutionarily conserved DNA architecture determines target specificity of the TWIST family bHLH transcription factors
- (2015) Andrew T. Chang et al. GENES & DEVELOPMENT
- Avoiding the Ends: Internal Epitope Tagging of Proteins Using Transposon Tn7
- (2015) R. E. Zordan et al. GENETICS
- Unraveling determinants of transcription factor binding outside the core binding site
- (2015) Michal Levo et al. GENOME RESEARCH
- A widespread role of the motif environment in transcription factor binding across diverse protein families
- (2015) Iris Dror et al. GENOME RESEARCH
- CETCh-seq: CRISPR epitope tagging ChIP-seq of DNA-binding proteins
- (2015) Daniel Savic et al. GENOME RESEARCH
- Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems
- (2015) Sergey Shmakov et al. MOLECULAR CELL
- Antibody anarchy: A call to order
- (2015) Monya Baker NATURE
- Reproducibility crisis: Blame it on the antibodies
- (2015) Monya Baker NATURE
- Engineered CRISPR-Cas9 nucleases with altered PAM specificities
- (2015) Benjamin P. Kleinstiver et al. NATURE
- BCL11A enhancer dissection by Cas9-mediated in situ saturating mutagenesis
- (2015) Matthew C. Canver et al. NATURE
- C2H2 zinc finger proteins greatly expand the human regulatory lexicon
- (2015) Hamed S Najafabadi et al. NATURE BIOTECHNOLOGY
- CAUSEL: an epigenome- and genome-editing pipeline for establishing function of noncoding GWAS variants
- (2015) Sándor Spisák et al. NATURE MEDICINE
- Inntags: small self-structured epitopes for innocuous protein tagging
- (2015) Maya V Georgieva et al. NATURE METHODS
- MMEJ-assisted gene knock-in using TALENs and CRISPR-Cas9 with the PITCh systems
- (2015) Tetsushi Sakuma et al. Nature Protocols
- A human transcription factor in search mode
- (2015) Kevin Hauser et al. NUCLEIC ACIDS RESEARCH
- HaploReg v4: systematic mining of putative causal variants, cell types, regulators and target genes for human complex traits and disease
- (2015) Lucas D. Ward et al. NUCLEIC ACIDS RESEARCH
- Tissue-based map of the human proteome
- (2015) M. Uhlen et al. SCIENCE
- The Hierarchy of Transcriptional Activation: From Enhancer to Promoter
- (2015) Douglas Vernimmen et al. TRENDS IN GENETICS
- A Scalable Genome-Editing-Based Approach for Mapping Multiprotein Complexes in Human Cells
- (2015) Mathieu Dalvai et al. Cell Reports
- Determination and Inference of Eukaryotic Transcription Factor Sequence Specificity
- (2014) Matthew T. Weirauch et al. CELL
- Pioneer transcription factors in cell reprogramming
- (2014) Makiko Iwafuchi-Doi et al. GENES & DEVELOPMENT
- A comparative encyclopedia of DNA elements in the mouse genome
- (2014) Feng Yue et al. NATURE
- Obesity-associated variants within FTO form long-range functional connections with IRX3
- (2014) Scott Smemo et al. NATURE
- Evolution of transcription factor binding in metazoans — mechanisms and functional implications
- (2014) Diego Villar et al. NATURE REVIEWS GENETICS
- Enhancer biology and enhanceropathies
- (2014) Edwin Smith et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Alanine repeats influence protein localization in splicing speckles and paraspeckles
- (2014) Shuo-Hsiu Chang et al. NUCLEIC ACIDS RESEARCH
- The GOA database: Gene Ontology annotation updates for 2015
- (2014) Rachael P. Huntley et al. NUCLEIC ACIDS RESEARCH
- UniProt: a hub for protein information
- (2014) NUCLEIC ACIDS RESEARCH
- Absence of a simple code: how transcription factors read the genome
- (2014) Matthew Slattery et al. TRENDS IN BIOCHEMICAL SCIENCES
- Induction of pluripotency in human somatic cells via a transient state resembling primitive streak-like mesendoderm
- (2014) Kazutoshi Takahashi et al. Nature Communications
- One-Step Generation of Mice Carrying Reporter and Conditional Alleles by CRISPR/Cas-Mediated Genome Engineering
- (2013) Hui Yang et al. CELL
- Dual role for Hox genes and Hox co-factors in conferring leg motoneuron survival and identity in Drosophila
- (2013) M. Baek et al. DEVELOPMENT
- Distinct Properties of Cell-Type-Specific and Shared Transcription Factor Binding Sites
- (2013) Jason Gertz et al. MOLECULAR CELL
- Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells
- (2013) Ophir Shalem et al. SCIENCE
- Why Transcription Factor Binding Sites Are Ten Nucleotides Long
- (2012) A. J. Stewart et al. GENETICS
- Integrative functional genomics identifies an enhancer looping to the SOX9 gene disrupted by the 17q24.3 prostate cancer risk locus
- (2012) X. Zhang et al. GENOME RESEARCH
- Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors
- (2012) J. Wang et al. GENOME RESEARCH
- A High-Throughput Chromatin Immunoprecipitation Approach Reveals Principles of Dynamic Gene Regulation in Mammals
- (2012) Manuel Garber et al. MOLECULAR CELL
- A map of the cis-regulatory sequences in the mouse genome
- (2012) Yin Shen et al. NATURE
- Interpreting noncoding genetic variation in complex traits and human disease
- (2012) Lucas D Ward et al. NATURE BIOTECHNOLOGY
- Breast cancer risk–associated SNPs modulate the affinity of chromatin for FOXA1 and alter gene expression
- (2012) Richard Cowper-Sal·lari et al. NATURE GENETICS
- Transcription factors: from enhancer binding to developmental control
- (2012) François Spitz et al. NATURE REVIEWS GENETICS
- TFClass: an expandable hierarchical classification of human transcription factors
- (2012) Edgar Wingender et al. NUCLEIC ACIDS RESEARCH
- Cofactor Binding Evokes Latent Differences in DNA Binding Specificity between Hox Proteins
- (2011) Matthew Slattery et al. CELL
- Embryonic stem cell–based mapping of developmental transcriptional programs
- (2011) Esteban O Mazzoni et al. NATURE METHODS
- Transposon Assisted Gene Insertion Technology (TAGIT): A Tool for Generating Fluorescent Fusion Proteins
- (2010) James A. Gregory et al. PLoS One
- Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding
- (2010) D. Schmidt et al. SCIENCE
- GeneCards Version 3: the human gene integrator
- (2010) M. Safran et al. Database-The Journal of Biological Databases and Curation
- A BAC-bacterial recombination method to generate physically linked multiple gene reporter DNA constructs
- (2009) Peter Maye et al. BMC BIOTECHNOLOGY
- Persistent Expression of FLAG-tagged Micro dystrophin in Nonhuman Primates Following Intramuscular and Vascular Delivery
- (2009) Louise R Rodino-Klapac et al. MOLECULAR THERAPY
- ChIP-seq accurately predicts tissue-specific activity of enhancers
- (2009) Axel Visel et al. NATURE
- A census of human transcription factors: function, expression and evolution
- (2009) Juan M. Vaquerizas et al. NATURE REVIEWS GENETICS
- ChIP-Seq of transcription factors predicts absolute and differential gene expression in embryonic stem cells
- (2009) Z. Ouyang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- DEVELOPMENTAL BIOLOGY: Pluripotent Chromatin State
- (2009) A. S. Chi et al. SCIENCE
- Integration of External Signaling Pathways with the Core Transcriptional Network in Embryonic Stem Cells
- (2008) Xi Chen et al. CELL
- Epitope tagging of endogenous proteins for genome-wide ChIP-chip studies
- (2008) Xiaodong Zhang et al. NATURE METHODS
- BAC TransgeneOmics: a high-throughput method for exploration of protein function in mammals
- (2008) Ina Poser et al. NATURE METHODS
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now