Comparison of specific endophytic bacterial communities in different developmental stages of Passiflora incarnata using culture‐dependent and culture‐independent analysis

Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies

(2017)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Influence of resistance breeding in common bean on rhizosphere microbiome composition and function

(2017) Lucas William Mendes et al.   ISME Journal

Bacterial Biogeography across the Amazon River-Ocean Continuum

(2017) Mary Doherty et al.   Frontiers in Microbiology

Heterogeneous expression of DnaK gene from Alicyclobacillus acidoterrestris improves the resistance of Escherichia coli against heat and acid stress

(2017) Xixi Xu et al.   AMB Express

Illumina sequencing-based community analysis of bacteria associated with different bryophytes collected from Tibet, China

(2016) Jing Yan Tang et al.   BMC MICROBIOLOGY

Cultivation Versus Molecular Analysis of Banana (Musa sp.) Shoot-Tip Tissue Reveals Enormous Diversity of Normally Uncultivable Endophytic Bacteria

(2016) Pious Thomas et al.   MICROBIAL ECOLOGY

Diversity of bacterial endophytes in 3 and 15 year-old grapevines of Vitis vinifera cv. Corvina and their potential for plant growth promotion and phytopathogen control

(2016) Marco Andreolli et al.   MICROBIOLOGICAL RESEARCH

Plant growth-promoting bacterial endophytes

(2016) Gustavo Santoyo et al.   MICROBIOLOGICAL RESEARCH

Communities of endophytic microorganisms in different developmental stages from a local variety as well as transgenic and conventional isogenic hybrids of maize

(2016) Kelly Justin da Silva et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Diversity of endophytic fungal and bacterial communities in Ilex paraguariensis grown under field conditions

(2016) María Laura Pérez et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Bacterial Communities in the Rhizosphere of Amilaceous Maize (Zea mays L.) as Assessed by Pyrosequencing

(2016) David Correa-Galeote et al.   Frontiers in Plant Science

Phylogenetic analysis of endophytic bacterial isolates from leaves of the medicinal plant Trichilia elegans A. Juss. (Meliaceae)

(2015) S.A. Rhoden et al.   GENETICS AND MOLECULAR RESEARCH

The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes

(2015) Pablo R. Hardoim et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Optimization of isolation and cultivation of bacterial endophytes through addition of plant extract to nutrient media

(2015) N. Eevers et al.   Microbial Biotechnology

Evaluating Bias of Illumina-Based Bacterial 16S rRNA Gene Profiles

(2014) Katherine Kennedy et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Modification of atmospheric sand-associated bacterial communities during Asian sandstorms in China and South Korea

(2014) S An et al.   HEREDITY

Understanding and engineering beneficial plant-microbe interactions: plant growth promotion in energy crops

(2014) Kerrie Farrar et al.   PLANT BIOTECHNOLOGY JOURNAL

Isolation and characterization of endophytic bacteria isolated from the leaves of the common bean (Phaseolus vulgaris)

(2013) Leonardo Emanuel de Oliveira Costa et al.   BRAZILIAN JOURNAL OF MICROBIOLOGY

Methylobacterium tarhaniae sp. nov., isolated from arid soil

(2013) A. Veyisoglu et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Passiflora incarnata L.: Ethnopharmacology, clinical application, safety and evaluation of clinical trials

(2013) M. Miroddi et al.   JOURNAL OF ETHNOPHARMACOLOGY

Generic and functional diversity in endophytic actinomycetes from wild Compositae plant species at South Sinai – Egypt

(2013) Sahar A. El-Shatoury et al.   RESEARCH IN MICROBIOLOGY

Bias problems in culture-independent analysis of environmental bacterial communities: a representative study on hydrocarbonoclastic bacteria

(2013) Husain Al-Awadhi et al.   SpringerPlus

Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties

(2012) Anja B Dohrmann et al.   ISME Journal

Isolation and characterization of indigenous endophytic bacteria associated with leaves of switchgrass (Panicum virgatumL.) cultivars

(2012) F. Gagne-Bourgue et al.   JOURNAL OF APPLIED MICROBIOLOGY

Growing Unculturable Bacteria

(2012) E. J. Stewart   JOURNAL OF BACTERIOLOGY

Next-generation sequencing technologies for environmental DNA research

(2012) SHADI SHOKRALLA et al.   MOLECULAR ECOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Evaluation of Subsampling-Based Normalization Strategies for Tagged High-Throughput Sequencing Data Sets from Gut Microbiomes

(2011) Daniel Aguirre de Cárcer et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bioactive natural products from endophytes: A review

(2011) B. Guo et al.   APPLIED BIOCHEMISTRY AND MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Interactive metagenomic visualization in a Web browser

(2011) Brian D Ondov et al.   BMC BIOINFORMATICS

Sphingomonas endophytica sp. nov., isolated from Artemisia annua L.

(2011) H.-Y. Huang et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Culture-dependent and culture-independent assessment of bacteria in the apple phyllosphere

(2011) E. Yashiro et al.   JOURNAL OF APPLIED MICROBIOLOGY

Effects of Plant Genotype and Growth Stage on the Betaproteobacterial Communities Associated with Different Potato Cultivars in Two Fields

(2010) O. Inceoglu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identifying biologically relevant differences between metagenomic communities

(2010) Donovan H. Parks et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Comparison of plant growth-promotion with Pseudomonas aeruginosa and Bacillus subtilis in three vegetables

(2010) A.O. Adesemoye et al.   BRAZILIAN JOURNAL OF MICROBIOLOGY

Diversity of endophytic bacteria in ginseng and their potential for plant growth promotion

(2010) Regupathy Thamizh Vendan et al.   JOURNAL OF MICROBIOLOGY

From Structure to Function: the Ecology of Host-Associated Microbial Communities

(2010) C. J. Robinson et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

A renaissance for the pioneering 16S rRNA gene

(2008) Susannah G Tringe et al.   CURRENT OPINION IN MICROBIOLOGY

Effects of plant genotype and growth stage on the structure of bacterial communities associated with potato (Solanum tuberosum L.)

(2008) Leo Van Overbeek et al.   FEMS MICROBIOLOGY ECOLOGY

Plant-driven selection of microbes

(2008) Anton Hartmann et al.   PLANT AND SOIL

Bacterial endophytes: recent developments and applications

(2007) Robert P. Ryan et al.   FEMS MICROBIOLOGY LETTERS