Understanding and engineering beneficial plant-microbe interactions: plant growth promotion in energy crops

Isolation, bioprospecting and diversity of salt-tolerant bacteria associated with sugarcane in soils of Pernambuco, Brazil

(2017) Maria C. B. S. Leite et al.   Revista Brasileira de Engenharia Agrícola e Ambiental

Isolation and characterization of endophytic bacteria colonizing halophyte and other salt tolerant plant species from coastal Gujarat

(2014) Arora Sanjay et al.   African Journal of Microbiology Research

Quorum quenching is an antivirulence strategy employed by endophytic bacteria

(2014) Parijat Kusari et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Synthetic microbial communities

(2014) Tobias Großkopf et al.   CURRENT OPINION IN MICROBIOLOGY

Cross-interference of plant development and plant–microbe interactions

(2014) Edouard Evangelisti et al.   CURRENT OPINION IN PLANT BIOLOGY

Transposon Mutagenesis of the Plant-Associated Bacillus amyloliquefaciens ssp. plantarum FZB42 Revealed That the nfrA and RBAM17410 Genes Are Involved in Plant-Microbe-Interactions

(2014) Anto Budiharjo et al.   PLoS One

Biological nitrogen fixation in non-legume plants

(2013) Carole Santi et al.   ANNALS OF BOTANY

Transcription activator-like effector nucleases (TALENs): A highly efficient and versatile tool for genome editing

(2013) Ning Sun et al.   BIOTECHNOLOGY AND BIOENGINEERING

Efficient genome editing in plants using a CRISPR/Cas system

(2013) Zhengyan Feng et al.   CELL RESEARCH

Systemic signaling during plant defense

(2013) Aardra Kachroo et al.   CURRENT OPINION IN PLANT BIOLOGY

Increased drought stress resilience of maize through endophytic colonization by Burkholderia phytofirmans PsJN and Enterobacter sp. FD17

(2013) Muhammad Naveed et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants

(2013) Thomas R Turner et al.   ISME Journal

Root ethylene signalling is involved in Miscanthus sinensis growth promotion by the bacterial endophyte Herbaspirillum frisingense GSF30T

(2013) Daniel Straub et al.   JOURNAL OF EXPERIMENTAL BOTANY

Quorum quenching activity in cell-free lysate of endophytic bacteria isolated from Pterocarpus santalinus Linn., and its effect on quorum sensing regulated biofilm in Pseudomonas aeruginosa PAO1

(2013) P.S. Rajesh et al.   MICROBIOLOGICAL RESEARCH

Bacteria with ACC deaminase can promote plant growth and help to feed the world

(2013) Bernard R. Glick   MICROBIOLOGICAL RESEARCH

On the front line: structural insights into plant–pathogen interactions

(2013) Lennart Wirthmueller et al.   NATURE REVIEWS MICROBIOLOGY

Effects of different plant root exudates and their organic acid components on chemotaxis, biofilm formation and colonization by beneficial rhizosphere-associated bacterial strains

(2013) Nan Zhang et al.   PLANT AND SOIL

Drought stress amelioration in wheat through inoculation with Burkholderia phytofirmans strain PsJN

(2013) Muhammad Naveed et al.   PLANT GROWTH REGULATION

Synthetic nucleases for genome engineering in plants: prospects for a bright future

(2013) Holger Puchta et al.   PLANT JOURNAL

Bacterial Adaptation through Loss of Function

(2013) Alison K. Hottes et al.   PLoS Genetics

The genome of the endophytic bacterium H. frisingense GSF30T identifies diverse strategies in the Herbaspirillum genus to interact with plants

(2013) Daniel Straub et al.   Frontiers in Microbiology

Comparative genome analysis of Burkholderia phytofirmans PsJN reveals a wide spectrum of endophytic lifestyles based on interaction strategies with host plants

(2013) Birgit Mitter et al.   Frontiers in Plant Science

MAMP (microbe-associated molecular pattern) triggered immunity in plants

(2013) Mari-Anne Newman et al.   Frontiers in Plant Science

A new species ofBurkholderiaisolated from sugarcane roots promotes plant growth

(2013) Chanyarat Paungfoo-Lonhienne et al.   Microbial Biotechnology

Growth promotion and colonization of switchgrass (Panicum virgatum) cv. Alamo by bacterial endophyte Burkholderia phytofirmans strain PsJN

(2012) Seonhwa Kim et al.   Biotechnology for Biofuels

Competition, Not Cooperation, Dominates Interactions among Culturable Microbial Species

(2012) Kevin R. Foster et al.   CURRENT BIOLOGY

Hormone signaling in plant development

(2012) Amanda Durbak et al.   CURRENT OPINION IN PLANT BIOLOGY

Transcriptomic analysis of responses to exudates reveal genes required for rhizosphere competence of the endophyteAzoarcussp. strain BH72

(2012) Teja Shidore et al.   ENVIRONMENTAL MICROBIOLOGY

Genomic comparison of the endophyte Herbaspirillum seropedicaeSmR1 and the phytopathogen Herbaspirillum rubrisubalbicansM1 by suppressive subtractive hybridization and partial genome sequencing

(2012) Rose A. Monteiro et al.   FEMS MICROBIOLOGY ECOLOGY

Growing Unculturable Bacteria

(2012) E. J. Stewart   JOURNAL OF BACTERIOLOGY

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Herbaspirillum-plant interactions: microscopical, histological and molecular aspects

(2012) Rose Adele Monteiro et al.   PLANT AND SOIL

Efficiency of Agrobacterium rhizogenes–mediated root transformation of Parasponia and Trema is temperature dependent

(2012) Qingqin Cao et al.   PLANT GROWTH REGULATION

Microbe-Associated Molecular Patterns-Triggered Root Responses Mediate Beneficial Rhizobacterial Recruitment in Arabidopsis

(2012) V. Lakshmanan et al.   PLANT PHYSIOLOGY

Refactoring the nitrogen fixation gene cluster from Klebsiella oxytoca

(2012) K. Temme et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbiology is the basis of sustainable agriculture: an opinion

(2011) I.A. Tikhonovich et al.   ANNALS OF APPLIED BIOLOGY

The Rules of Engagement in the Legume-Rhizobial Symbiosis

(2011) Giles E.D. Oldroyd et al.   Annual Review of Genetics

Roles of Arbuscular Mycorrhizas in Plant Nutrition and Growth: New Paradigms from Cellular to Ecosystem Scales

(2011) Sally E. Smith et al.   Annual Review of Plant Biology

Endophyte-assisted promotion of biomass production and metal-uptake of energy crop sweet sorghum by plant-growth-promoting endophyte Bacillus sp. SLS18

(2011) Shenglian Luo et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Diazotrophyc rhizobacteria isolated from sugarcane can release amino acids in a synthetic culture medium

(2011) Zilda M. de Oliveira et al.   BIOLOGY AND FERTILITY OF SOILS

Living inside plants: bacterial endophytes

(2011) Barbara Reinhold-Hurek et al.   CURRENT OPINION IN PLANT BIOLOGY

Inoculation of hybrid poplar with the endophytic bacterium Enterobacter sp. 638 increases biomass but does not impact leaf level physiology

(2011) Alistair Rogers et al.   Global Change Biology Bioenergy

Functional Characteristics of an Endophyte Community Colonizing Rice Roots as Revealed by Metagenomic Analysis

(2011) A. Sessitsch et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Burkholderia phytofirmansPsJN PrimesVitis viniferaL. and Confers a Better Tolerance to Low Nonfreezing Temperatures

(2011) Andreas Theocharis et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Genetic diversity and plant growth promoting traits of diazotrophic bacteria isolated from two Pennisetum purpureum Schum. genotypes grown in the field

(2011) Sandy Sampaio Videira et al.   PLANT AND SOIL

Programmable Ligand Detection System in Plants through a Synthetic Signal Transduction Pathway

(2011) Mauricio S. Antunes et al.   PLoS One

Bacterial community structures are unique and resilient in full-scale bioenergy systems

(2011) J. J. Werner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Involvement of phytohormones in the development of interaction between wheat seedlings and endophytic Bacillus subtilis strain 11BM

(2011) A. A. Egorshina et al.   RUSSIAN JOURNAL OF PLANT PHYSIOLOGY

Isolation and characterisation of aerobic endospore forming Bacilli from sugarcane rhizosphere for the selection of strains with agriculture potentialities

(2011) Teresa de los Milagros Orberá Ratón et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Genome of Herbaspirillum seropedicae Strain SmR1, a Specialized Diazotrophic Endophyte of Tropical Grasses

(2011) Fábio O. Pedrosa et al.   PLoS Genetics

Endophytic Life Strategies Decoded by Genome and Transcriptome Analyses of the Mutualistic Root Symbiont Piriformospora indica

(2011) Alga Zuccaro et al.   PLoS Pathogens

Differential Growth Responses of Soil Bacterial Taxa to Carbon Substrates of Varying Chemical Recalcitrance

(2011) Katherine C. Goldfarb et al.   Frontiers in Microbiology

Biodiversity, bioactive natural products and biotechnological potential of plant-associated endophytic actinobacteria

(2010) Sheng Qin et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Gluconacetobacter diazotrophicus levansucrase is involved in tolerance to NaCl, sucrose and desiccation, and in biofilm formation

(2010) M. Lourdes Velázquez-Hernández et al.   ARCHIVES OF MICROBIOLOGY

Influence of organic fertilization on the number of culturable diazotrophic endophytic bacteria isolated from sugarcane

(2010) Ricardo Pariona-Llanos et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities?

(2010) Paul G. Dennis et al.   FEMS MICROBIOLOGY ECOLOGY

Diversity of endophytic bacteria in Brazilian sugarcane

(2010) G.S. Magnani et al.   GENETICS AND MOLECULAR RESEARCH

Azospirillum sp. Strain B510 Enhances Rice Growth and Yield

(2010) Tsuyoshi Isawa et al.   MICROBES AND ENVIRONMENTS

Reduced evolvability of Escherichia coli MDS42, an IS-less cellular chassis for molecular and synthetic biology applications

(2010) Kinga Umenhoffer et al.   Microbial Cell Factories

Quantitative Proteomic Analysis of the Interaction Between the Endophytic Plant-Growth-Promoting BacteriumGluconacetobacter diazotrophicusand Sugarcane

(2010) Letícia M. S. Lery et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

The tale of our other genome

(2010) Liping Zhao   NATURE

Plant immunity: towards an integrated view of plant–pathogen interactions

(2010) Peter N. Dodds et al.   NATURE REVIEWS GENETICS

Evolutionary microbial genomics: insights into bacterial host adaptation

(2010) Christina Toft et al.   NATURE REVIEWS GENETICS

Inoculation with selected strains of Azospirillum brasilense and A. lipoferum improves yields of maize and wheat in Brazil

(2010) Mariangela Hungria et al.   PLANT AND SOIL

Targeting expression of a fungal ferulic acid esterase to the apoplast, endoplasmic reticulum or golgi can disrupt feruloylation of the growing cell wall and increase the biodegradability of tall fescue(Festuca arundinacea)

(2010) Marcia M. de O. Buanafina et al.   PLANT BIOTECHNOLOGY JOURNAL

Diazotrophic endophytes of native black cottonwood and willow

(2010) Sharon L. Doty et al.   SYMBIOSIS

Genome Sequence of the Plant Growth Promoting Endophytic Bacterium Enterobacter sp. 638

(2010) Safiyh Taghavi et al.   PLoS Genetics

Plants, Mycorrhizal Fungi, and Bacteria: A Network of Interactions

(2009) Paola Bonfante et al.   Annual Review of Microbiology

ACC (1-Aminocyclopropane-1-Carboxylate) Deaminase Activity, a Widespread Trait in Burkholderia Species, and Its Growth-Promoting Effect on Tomato Plants

(2009) J. Onofre-Lemus et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5

(2009) Marcelo Bertalan et al.   BMC GENOMICS

Poplar and its Bacterial Endophytes: Coexistence and Harmony

(2009) Daniel van der Lelie et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Rhizosphere chemical dialogues: plant–microbe interactions

(2009) Dayakar V Badri et al.   CURRENT OPINION IN BIOTECHNOLOGY

Phytoremediation: plant–endophyte partnerships take the challenge

(2009) Nele Weyens et al.   CURRENT OPINION IN BIOTECHNOLOGY

Comparative Biogeochemical Cycles of Bioenergy Crops Reveal Nitrogen-Fixation and Low Greenhouse Gas Emissions in a Miscanthus × giganteus Agro-Ecosystem

(2009) Sarah C. Davis et al.   ECOSYSTEMS

Host legume-exuded antimetabolites optimize the symbiotic rhizosphere

(2009) Tao Cai et al.   MOLECULAR MICROBIOLOGY

Characterization of bacterial endophytes of sweet potato plants

(2009) Zareen Khan et al.   PLANT AND SOIL

Carbon flow in the rhizosphere: carbon trading at the soil–root interface

(2009) D. L. Jones et al.   PLANT AND SOIL

The Dynamics and Time Scale of Ongoing Genomic Erosion in Symbiotic Bacteria

(2009) N. A. Moran et al.   SCIENCE

Plant growth-promoting bacteria in the rhizo- and endosphere of plants: Their role, colonization, mechanisms involved and prospects for utilization

(2009) Stéphane Compant et al.   SOIL BIOLOGY & BIOCHEMISTRY

Exploiting plant–microbe partnerships to improve biomass production and remediation

(2009) Nele Weyens et al.   TRENDS IN BIOTECHNOLOGY

Genome Survey and Characterization of Endophytic Bacteria Exhibiting a Beneficial Effect on Growth and Development of Poplar Trees

(2008) S. Taghavi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparative transcriptome analysis ofAgrobacterium tumefaciensin response to plant signal salicylic acid, indole-3-acetic acid and γ-amino butyric acid reveals signalling cross-talk andAgrobacterium-plant co-evolution

(2008) Ze-Chun Yuan et al.   CELLULAR MICROBIOLOGY

Herbaceous energy crop development: recent progress and future prospects

(2008) Emily A Heaton et al.   CURRENT OPINION IN BIOTECHNOLOGY

Endophytic root colonization of gramineous plants by Herbaspirillum frisingense

(2008) Michael Rothballer et al.   FEMS MICROBIOLOGY ECOLOGY

ENDOPHYTIC BACTERIA FROM SEEDS OFNICOTIANA TABACUMCAN REDUCE CADMIUM PHYTOTOXICITY

(2008) Chiara Mastretta et al.   INTERNATIONAL JOURNAL OF PHYTOREMEDIATION

Ecological aspects of mycorrhizal symbiosis: with special emphasis on the functional diversity of interactions involving the extraradical mycelium

(2008) R. D. Finlay   JOURNAL OF EXPERIMENTAL BOTANY

Comparative proteomic studies of root–microbe interactions

(2008) Ulrike Mathesius   Journal of Proteomics

Endophytic Actinobacteria Induce Defense Pathways inArabidopsis thaliana

(2008) V. M. Conn et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Expression of a fungal ferulic acid esterase increases cell wall digestibility of tall fescue (Festuca arundinacea)

(2008) Marcia M. de O. Buanafina et al.   PLANT BIOTECHNOLOGY JOURNAL

Properties of bacterial endophytes and their proposed role in plant growth

(2008) Pablo R. Hardoim et al.   TRENDS IN MICROBIOLOGY

Rhizosphere bacteria help plants tolerate abiotic stress

(2008) Jungwook Yang et al.   TRENDS IN PLANT SCIENCE

Next-generation biomass feedstocks for biofuel production

(2008) Blake A Simmons et al.   GENOME BIOLOGY

Bacterial endophytes: recent developments and applications

(2007) Robert P. Ryan et al.   FEMS MICROBIOLOGY LETTERS