Linkage Analysis and Haplotype Phasing in Experimental Autopolyploid Populations with High Ploidy Level Using Hidden Markov Models

polymapR—linkage analysis and genetic map construction from F1 populations of outcrossing polyploids

(2018) Peter M Bourke et al.   BIOINFORMATICS

De novo construction of polyploid linkage maps using discrete graphical models

(2018) Pariya Behrouzi et al.   BIOINFORMATICS

QTL mapping of potato chip color and tuber traits within an autotetraploid family

(2017) Kyle Rak et al.   MOLECULAR BREEDING

An ultra-dense integrated linkage map for hexaploid chrysanthemum enables multi-allelic QTL analysis

(2017) Geert van Geest et al.   THEORETICAL AND APPLIED GENETICS

A high-density SNP genetic map consisting of a complete set of homologous groups in autohexaploid sweetpotato (Ipomoea batatas)

(2017) Kenta Shirasawa et al.   Scientific Reports

Probabilistic Multilocus Haplotype Reconstruction in Outcrossing Tetraploids

(2016) Chaozhi Zheng et al.   GENETICS

QTL mapping for downy mildew resistance in cucumber via bulked segregant analysis using next-generation sequencing and conventional methods

(2016) Khin Thanda Win et al.   THEORETICAL AND APPLIED GENETICS

Integrating haplotype-specific linkage maps in tetraploid species using SNP markers

(2016) Peter M. Bourke et al.   THEORETICAL AND APPLIED GENETICS

A rapid marker ordering approach for high-density genetic linkage maps in experimental autotetraploid populations using multidimensional scaling

(2016) K. F. Preedy et al.   THEORETICAL AND APPLIED GENETICS

Probabilistic Multilocus Haplotype Reconstruction in Outcrossing Tetraploids

(2016) Chaozhi Zheng et al.   GENETICS

The Double-Reduction Landscape in Tetraploid Potato as Revealed by a High-Density Linkage Map

(2015) P. M. Bourke et al.   GENETICS

Analysis of a Complex Polyploid Plant Genome using Molecular Markers: Strong Evidence for Segmental Allooctoploidy in Garden Dahlias

(2015) Stephan Schie et al.   Plant Genome

The polyploidy revolution then...and now: Stebbins revisited

(2014) D. E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Genetic Dissection of a Genomic Region with Pleiotropic Effects on Domestication Traits in Maize Reveals Multiple Linked QTL

(2014) Zachary H. Lemmon et al.   GENETICS

Carotenoids gene markers for sweetpotato (Ipomoea batatas L. Lam): applications in genetic mapping, diversity evaluation and cross-species transference

(2014) C. M. Arizio et al.   MOLECULAR GENETICS AND GENOMICS

Are polyploids really evolutionary dead-ends (again)? A critical reappraisal of Mayroseet al. (2011)

(2014) Douglas E. Soltis et al.   NEW PHYTOLOGIST

QTL mapping in autotetraploids using SNP dosage information

(2014) Christine A. Hackett et al.   THEORETICAL AND APPLIED GENETICS

A statistical model for QTL mapping in polysomic autotetraploids underlying double reduction

(2013) F. Xu et al.   BRIEFINGS IN BIOINFORMATICS

A Computational Approach to Developing Mathematical Models of Polyploid Meiosis

(2013) M. Rehmsmeier   GENETICS

Linkage Analysis and QTL Mapping Using SNP Dosage Data in a Tetraploid Potato Mapping Population

(2013) Christine A. Hackett et al.   PLoS One

A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor

(2013) M.-C. Luo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SNP genotyping allows an in-depth characterisation of the genome of sugarcane and other complex autopolyploids

(2013) Antonio A. F. Garcia et al.   Scientific Reports

The simulation of meiosis in diploid and tetraploid organisms using various genetic models

(2012) Roeland E Voorrips et al.   BMC BIOINFORMATICS

Efficient Exact Maximum a Posteriori Computation for Bayesian SNP Genotyping in Polyploids

(2012) Oliver Serang et al.   PLoS One

Genotype calling in tetraploid species from bi-allelic marker data using mixture models

(2011) Roeland E Voorrips et al.   BMC BIOINFORMATICS

Microcollinearity between autopolyploid sugarcane and diploid sorghum genomes

(2010) Jianping Wang et al.   BMC GENOMICS

Multilocus tetrasomic linkage analysis using hidden Markov chain model

(2010) L. J. Leach et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Every genome sequence needs a good map

(2009) H. A. Lewin et al.   GENOME RESEARCH

Evaluation of algorithms used to order markers on genetic maps

(2009) M Mollinari et al.   HEREDITY

Efficient and Accurate Construction of Genetic Linkage Maps from the Minimum Spanning Tree of a Graph

(2008) Yonghui Wu et al.   PLoS Genetics