Interaction specificity of clustered protocadherins inferred from sequence covariation and structural analysis
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Interaction specificity of clustered protocadherins inferred from sequence covariation and structural analysis
Authors
Keywords
-
Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 116, Issue 36, Pages 17825-17830
Publisher
Proceedings of the National Academy of Sciences
Online
2019-08-21
DOI
10.1073/pnas.1821063116
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Visualization of clustered protocadherin neuronal self-recognition complexes
- (2019) Julia Brasch et al. NATURE
- Applications of sequence coevolution in membrane protein biochemistry
- (2018) John M. Nicoludis et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES
- Writing, Reading, and Translating the Clustered Protocadherin Cell Surface Recognition Code for Neural Circuit Assembly
- (2018) George Mountoufaris et al. Annual Review of Cell and Developmental Biology
- Affinity capture of polyribosomes followed by RNAseq (ACAPseq), a discovery platform for protein-protein interactions
- (2018) Xi Peng et al. eLife
- Mutation effects predicted from sequence co-variation
- (2017) Thomas A Hopf et al. NATURE BIOTECHNOLOGY
- Dissociation of a Dynamic Protein Complex Studied by All-Atom Molecular Simulations
- (2016) Liqun Zhang et al. BIOPHYSICAL JOURNAL
- Origins of Allostery and Evolvability in Proteins: A Case Study
- (2016) Arjun S. Raman et al. CELL
- Structured States of Disordered Proteins from Genomic Sequences
- (2016) Agnes Toth-Petroczy et al. CELL
- Direct coevolutionary couplings reflect biophysical residue interactions in proteins
- (2016) Alice Coucke et al. JOURNAL OF CHEMICAL PHYSICS
- Connecting the Sequence-Space of Bacterial Signaling Proteins to Phenotypes Using Coevolutionary Landscapes
- (2016) R. R. Cheng et al. MOLECULAR BIOLOGY AND EVOLUTION
- Structural Basis of Diverse Homophilic Recognition by Clustered α- and β-Protocadherins
- (2016) Kerry Marie Goodman et al. NEURON
- Inferring interaction partners from protein sequences
- (2016) Anne-Florence Bitbol et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Simultaneous identification of specifically interacting paralogs and interprotein contacts by direct coupling analysis
- (2016) Thomas Gueudré et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Homophilic Protocadherin Cell-Cell Interactions Promote Dendrite Complexity
- (2016) Michael J. Molumby et al. Cell Reports
- γ-Protocadherin structural diversity and functional implications
- (2016) Kerry Marie Goodman et al. eLife
- A mathematical model explains saturating axon guidance responses to molecular gradients
- (2016) Huyen Nguyen et al. eLife
- Antiparallel protocadherin homodimers use distinct affinity- and specificity-mediating regions in cadherin repeats 1-4
- (2016) John M Nicoludis et al. eLife
- Evolving New Protein-Protein Interaction Specificity through Promiscuous Intermediates
- (2015) Christopher D. Aakre et al. CELL
- Molecular Logic of Neuronal Self-Recognition through Protocadherin Domain Interactions
- (2015) Rotem Rubinstein et al. CELL
- Structure and Sequence Analyses of Clustered Protocadherins Reveal Antiparallel Interactions that Mediate Homophilic Specificity
- (2015) John M. Nicoludis et al. STRUCTURE
- Protocadherin-dependent dendritic self-avoidance regulates neural connectivity and circuit function
- (2015) Dimitar Kostadinov et al. eLife
- Single-Cell Identity Generated by Combinatorial Homophilic Interactions between α, β, and γ Protocadherins
- (2014) Chan Aye Thu et al. CELL
- Toward rationally redesigning bacterial two-component signaling systems using coevolutionary information
- (2014) Ryan R. Cheng et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Robust and accurate prediction of residue–residue interactions across protein interfaces using evolutionary information
- (2014) Sergey Ovchinnikov et al. eLife
- Sequence co-evolution gives 3D contacts and structures of protein complexes
- (2014) Thomas A Hopf et al. eLife
- Determinants of specificity in two-component signal transduction
- (2013) Anna I Podgornaia et al. CURRENT OPINION IN MICROBIOLOGY
- Coevolutionary signals across protein lineages help capture multiple protein conformations
- (2013) F. Morcos et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Maturation of postnatally generated olfactory bulb granule cells depends on functional γ-protocadherin expression
- (2013) Julia Ledderose et al. Scientific Reports
- Three-Dimensional Structures of Membrane Proteins from Genomic Sequencing
- (2012) Thomas A. Hopf et al. CELL
- Adaptive Mutations that Prevent Crosstalk Enable the Expansion of Paralogous Signaling Protein Families
- (2012) Emily J. Capra et al. CELL
- Protocadherins mediate dendritic self-avoidance in the mammalian nervous system
- (2012) Julie L. Lefebvre et al. NATURE
- γ-Protocadherins Control Cortical Dendrite Arborization by Regulating the Activity of a FAK/PKC/MARCKS Signaling Pathway
- (2012) Andrew M. Garrett et al. NEURON
- Genomics-aided structure prediction
- (2012) J. I. Sulkowska et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Protocadherin clusters and cell adhesion kinase regulate dendrite complexity through Rho GTPase
- (2012) Lun Suo et al. Journal of Molecular Cell Biology
- Protein 3D Structure Computed from Evolutionary Sequence Variation
- (2011) Debora S. Marks et al. PLoS One
- Direct-coupling analysis of residue coevolution captures native contacts across many protein families
- (2011) F. Morcos et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Combinatorial homophilic interaction between -protocadherin multimers greatly expands the molecular diversity of cell adhesion
- (2010) D. Schreiner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Allosteric Role of the Ca2+ Switch in Adhesion and Elasticity of C-Cadherin
- (2008) Marcos Sotomayor et al. BIOPHYSICAL JOURNAL
- Inhibition of protocadherin-α function results in neuronal death in the developing zebrafish
- (2008) Michelle R. Emond et al. DEVELOPMENTAL BIOLOGY
- Cooperativity and biological complexity
- (2008) Adrian Whitty Nature Chemical Biology
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started