Identification and Phylogeny of Cryptic Species of the Daphnia Longispina Complex (Anomopoda, Daphniidae) Using ITS2 Secondary Structure

Cryptic species as a window into the paradigm shift of the species concept

(2018) Cene Fišer et al.   MOLECULAR ECOLOGY

Resolution of the Daphnia umbra problem (Crustacea: Cladocera) using an integrated taxonomic approach

(2018) Elena I Zuykova et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets

(2017) Julio Rozas et al.   MOLECULAR BIOLOGY AND EVOLUTION

Population structure and cryptic species in the cosmopolitan rotifer Euchlanis dilatata

(2017) Azar Kordbacheh et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Molecular phylogeny of Oncaeidae (Copepoda) using nuclear ribosomal internal transcribed spacer (ITS rDNA)

(2017) Iole Di Capua et al.   PLoS One

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genetic polymorphism, haplotype distribution, and phylogeny of Daphnia (Cladocera: Anomopoda) species from the water bodies of russia as inferred from the 16S mtDNA gene sequencing

(2016) E. I. Zuykova et al.   RUSSIAN JOURNAL OF GENETICS

Фаунистические комплексы Cladocera (Crustacea, Branchiopoda) Восточной Сибири и Дальнего Востока России

(2016) А. А. Котов   ZOOLOGICHESKY ZHURNAL

Популяционная и межвидовая морфологическая изменчивость видов родаDaphniaO.F. Müller 1785 (Cladocera, Daphniidae)

(2016) Е. И. Зуйкова et al.   ZOOLOGICHESKY ZHURNAL

A critical review of the current taxonomy of the genus Daphnia O. F. Müller, 1785 (Anomopoda, Cladocera)

(2015) ALEXEY A. KOTOV   ZOOTAXA

Local and regional founder effects in lake zooplankton persist after thousands of years despite high dispersal potential

(2014) M. Ventura et al.   MOLECULAR ECOLOGY

Phylogenetic Information Content of Copepoda Ribosomal DNA Repeat Units: ITS1 and ITS2 Impact

(2014) Maxim V. Zagoskin et al.   Biomed Research International

Molecular genetic identification and phylogeny of Daphnia species (Crustacea, Cladocera) from water bodies of the Lake Chany basin

(2013) E. I. Zuykova et al.   RUSSIAN JOURNAL OF GENETICS

Identification of the Daphnia species (Crustacea: Cladocera) in the lakes of the Ob and Yenisei River basins: morphological and molecular phylogenetic approaches

(2012) Elena I. Zuykova et al.   HYDROBIOLOGIA

At the edge and on the top: molecular identification and ecology of Daphnia dentifera and D. longispina in high-altitude Asian lakes

(2012) Markus Möst et al.   HYDROBIOLOGIA

The ITS region of groundwater amphipods: length, secondary structure and phylogenetic information content in Crangonyctoids and Niphargids

(2012) Etienne Kornobis et al.   JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH

Mitochondrial sequence variation suggests extensive cryptic diversity within the Western PalearcticDaphnia longispinacomplex

(2012) Adam Petrusek et al.   LIMNOLOGY AND OCEANOGRAPHY

The long-term consequences of hybridization between the two Daphnia species, D. galeata and D. dentifera, in mature habitats

(2011) Seiji Ishida et al.   BMC EVOLUTIONARY BIOLOGY

Identifying hybridizing taxa within the Daphnia longispina species complex: a comparison of genetic methods and phenotypic approaches

(2010) Štepánka Dlouhá et al.   HYDROBIOLOGIA

ITS2 secondary structure improves phylogeny estimation in a radiation of blue butterflies of the subgenus Agrodiaetus (Lepidoptera: Lycaenidae: Polyommatus )

(2009) Martin Wiemers et al.   BMC EVOLUTIONARY BIOLOGY

Dynamic reticulate evolution in aDaphniamultispecies complex

(2009) Sabine Gießler et al.   Journal of Experimental Zoology Part A-Ecological Genetics and Physiology

Secondary structure and phylogenetic analysis of the internal transcribed spacers 1 and 2 of bush crickets (Orthoptera: Tettigoniidae: Barbitistini)

(2009) Berit Ullrich et al.   JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH

ITS2 sequence–structure analysis in phylogenetics: A how-to manual for molecular systematics

(2009) Jörg Schultz et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Compensatory base changes illuminate morphologically difficult taxonomy

(2009) Michael W. Ruhl et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Accurate and efficient reconstruction of deep phylogenies from structured RNAs

(2009) Roman R. Stocsits et al.   NUCLEIC ACIDS RESEARCH

The ITS2 Database III—sequences and structures for phylogeny

(2009) Christian Koetschan et al.   NUCLEIC ACIDS RESEARCH

ProfDistS: (profile-) distance based phylogeny on sequence--structure alignments

(2008) M. Wolf et al.   BIOINFORMATICS

5.8S-28S rRNA interaction and HMM-based ITS2 annotation

(2008) Alexander Keller et al.   GENE

Using phylogeographic analyses of gene trees to test species status and processes

(2003) Alan R. Templeton   MOLECULAR ECOLOGY