Shotgun Proteomic Analysis Highlights the Roles of Long-Lived mRNAs and De Novo Transcribed mRNAs in Rice Seeds upon Imbibition

Seeds: A Unique System to Study Translational Regulation

(2019) Nikita Sajeev et al.   TRENDS IN PLANT SCIENCE

An Integrated “Multi-Omics” Comparison of Embryo and Endosperm Tissue-Specific Features and Their Impact on Rice Seed Quality

(2017) Marc Galland et al.   Frontiers in Plant Science

Global Proteome Analyses of Lysine Acetylation and Succinylation Reveal the Widespread Involvement of both Modification in Metabolism in the Embryo of Germinating Rice Seed

(2016) Dongli He et al.   JOURNAL OF PROTEOME RESEARCH

Extensive translational regulation during seed germination revealed by polysomal profiling

(2016) Bing Bai et al.   NEW PHYTOLOGIST

Arabidopsis AtDjA3 Null Mutant Shows Increased Sensitivity to Abscisic Acid, Salt, and Osmotic Stress in Germination and Post-germination Stages

(2016) Silvia Salas-Muñoz et al.   Frontiers in Plant Science

Accumulation of long-lived mRNAs associated with germination in embryos during seed development of rice

(2015) Naoto Sano et al.   JOURNAL OF EXPERIMENTAL BOTANY

CARMO: a comprehensive annotation platform for functional exploration of rice multi-omics data

(2015) Jiawei Wang et al.   PLANT JOURNAL

Germination Potential of Dormant and Nondormant Arabidopsis Seeds Is Driven by Distinct Recruitment of Messenger RNAs to Polysomes

(2015) Isabelle Basbouss-Serhal et al.   PLANT PHYSIOLOGY

Regulation of mRNA translation controls seed germination and is critical for seedling vigor

(2015) Marc Galland et al.   Frontiers in Plant Science

Rice alcohol dehydrogenase 1 promotes survival and has a major impact on carbohydrate metabolism in the embryo and endosperm when seeds are germinated in partially oxygenated water

(2014) Hirokazu Takahashi et al.   ANNALS OF BOTANY

Mitochondrial biogenesis in plants during seed germination

(2014) Simon R. Law et al.   MITOCHONDRION

In-Depth Proteomic Analysis of Rice Embryo Reveals its Important Roles in Seed Germination

(2014) Chao Han et al.   PLANT AND CELL PHYSIOLOGY

Compartmentation and Dynamics of Flavone Metabolism in Dry and Germinated Rice Seeds

(2014) Marc Galland et al.   PLANT AND CELL PHYSIOLOGY

The Role of Momilactones in Rice Allelopathy

(2013) Hisashi Kato-Noguchi et al.   JOURNAL OF CHEMICAL ECOLOGY

Dynamic Proteomics Emphasizes the Importance of Selective mRNA Translation and Protein Turnover duringArabidopsisSeed Germination

(2013) Marc Galland et al.   MOLECULAR & CELLULAR PROTEOMICS

Proteomics of rice seed germination

(2013) Dongli He et al.   Frontiers in Plant Science

Insights into the regulation of protein abundance from proteomic and transcriptomic analyses

(2012) Christine Vogel et al.   NATURE REVIEWS GENETICS

Proteomic Analysis of Embryonic Proteins Synthesized from Long-Lived mRNAs During Germination of Rice Seeds

(2012) Naoto Sano et al.   PLANT AND CELL PHYSIOLOGY

Nucleotide and RNA Metabolism Prime Translational Initiation in the Earliest Events of Mitochondrial Biogenesis during Arabidopsis Germination

(2012) S. R. Law et al.   PLANT PHYSIOLOGY

Cell division and cell elongation in the coleoptile of rice alcohol dehydrogenase 1-deficient mutant are reduced under complete submergence

(2011) Hirokazu Takahashi et al.   ANNALS OF BOTANY

First off the mark: early seed germination

(2011) Karin Weitbrecht et al.   JOURNAL OF EXPERIMENTAL BOTANY

A label-free quantitative shotgun proteomics analysis of rice grain development

(2011) Joohyun Lee et al.   Proteome Science

Constructing the metabolic and regulatory pathways in germinating rice seeds through proteomic approach

(2011) Dongli He et al.   PROTEOMICS

Less label, more free: Approaches in label-free quantitative mass spectrometry

(2011) Karlie A. Neilson et al.   PROTEOMICS

Recent progress in liquid chromatography-based separation and label-free quantitative plant proteomics

(2010) A. Matros et al.   PHYTOCHEMISTRY

Stored and neosynthesized mRNA in Arabidopsis seeds: effects of cycloheximide and controlled deterioration treatment on the resumption of transcription during imbibition

(2010) Mitsuhiro Kimura et al.   PLANT MOLECULAR BIOLOGY

Large-Scale Comparative Phosphoproteomics Identifies Conserved Phosphorylation Sites in Plants

(2010) H. Nakagami et al.   PLANT PHYSIOLOGY

Structure and Organization of Mitochondrial Respiratory Complexes: A New Understanding of an Old Subject

(2009) Giorgio Lenaz et al.   ANTIOXIDANTS & REDOX SIGNALING

Genome-wide analysis of genes targeted by qLTG3-1 controlling low-temperature germinability in rice

(2009) Kenji Fujino et al.   PLANT MOLECULAR BIOLOGY

Flooding Stress: Acclimations and Genetic Diversity

(2008) J. Bailey-Serres et al.   Annual Review of Plant Biology

Recent Advances Regarding Diterpene Cyclase Genes in Higher Plants and Fungi

(2008) Tomonobu TOYOMASU   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Mapping Metabolic and Transcript Temporal Switches during Germination in Rice Highlights Specific Transcription Factors and the Role of RNA Instability in the Germination Process

(2008) K. A. Howell et al.   PLANT PHYSIOLOGY

Molecular identification of a major quantitative trait locus, qLTG3-1, controlling low-temperature germinability in rice

(2008) K. Fujino et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-Scale Proteomics Reveals Arabidopsis thaliana Gene Models and Proteome Dynamics

(2008) K. Baerenfaller et al.   SCIENCE