Dynamic Proteomics Emphasizes the Importance of Selective mRNA Translation and Protein Turnover duringArabidopsisSeed Germination

Transcriptional Dynamics of Two Seed Compartments with Opposing Roles in Arabidopsis Seed Germination

(2013) B. J. W. Dekkers et al.   PLANT PHYSIOLOGY

Seed Germination and Vigor

(2012) Loïc Rajjou et al.   Annual Review of Plant Biology

Glyoxylate Reductase Isoform 1 is Localized in the Cytosol and Not Peroxisomes in Plant Cells

(2012) Steven L. K. Ching et al.   Journal of Integrative Plant Biology

Cold Stratification and Exogenous Nitrates Entail Similar Functional Proteome Adjustments during Arabidopsis Seed Dormancy Release

(2012) Erwann Arc et al.   JOURNAL OF PROTEOME RESEARCH

Determining Degradation and Synthesis Rates ofArabidopsisProteins Using the Kinetics of Progressive15N Labeling of Two-dimensional Gel-separated Protein Spots

(2012) Lei Li et al.   MOLECULAR & CELLULAR PROTEOMICS

A gain-of-function mutation in theROC1gene alters plant architecture inArabidopsis

(2012) Xiqing Ma et al.   NEW PHYTOLOGIST

Proteomic Analysis of Embryonic Proteins Synthesized from Long-Lived mRNAs During Germination of Rice Seeds

(2012) Naoto Sano et al.   PLANT AND CELL PHYSIOLOGY

The cyclophilin ROC1 links phytochrome and cryptochrome to brassinosteroid sensitivity

(2012) Santiago A. Trupkin et al.   PLANT JOURNAL

RRP41L, a Putative Core Subunit of the Exosome, Plays an Important Role in Seed Germination and Early Seedling Growth in Arabidopsis

(2012) M. Yang et al.   PLANT PHYSIOLOGY

Ribosomes and translation in plant developmental control

(2012) Gorou Horiguchi et al.   PLANT SCIENCE

MicroRNA159 Can Act as a Switch or Tuning MicroRNA Independently of Its Abundance in Arabidopsis

(2012) Maria M. Alonso-Peral et al.   PLoS One

OsLEA3-2, an Abiotic Stress Induced Gene of Rice Plays a Key Role in Salt and Drought Tolerance

(2012) Jianli Duan et al.   PLoS One

Unravelling the complex trait of seed quality: using natural variation through a combination of physiology, genetics and -omics technologies

(2012) Wilco Ligterink et al.   SEED SCIENCE RESEARCH

Control of cytoplasmic translation in plants

(2012) Douglas G. Muench et al.   Wiley Interdisciplinary Reviews-RNA

The Seed Proteome Web Portal

(2012) Marc Galland et al.   Frontiers in Plant Science

Proteomic analyses of apoplastic proteins from germinating Arabidopsis thaliana pollen

(2011) Weina Ge et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Ascorbic acid and reactive oxygen species are involved in the inhibition of seed germination by abscisic acid in rice seeds

(2011) N. Ye et al.   JOURNAL OF EXPERIMENTAL BOTANY

First off the mark: early seed germination

(2011) Karin Weitbrecht et al.   JOURNAL OF EXPERIMENTAL BOTANY

Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice

(2011) Wenxuan Li et al.   JOURNAL OF PLANT PHYSIOLOGY

Overexpression of AtLEA3-3 confers resistance to cold stress in Escherichia coli and provides enhanced osmotic stress tolerance and ABA sensitivity in Arabidopsis thaliana

(2011) Pengshan Zhao et al.   MOLECULAR BIOLOGY

Protein disulfide isomerase-2 of Arabidopsis mediates protein folding and localizes to both the secretory pathway and nucleus, where it interacts with maternal effect embryo arrest factor

(2011) Eun Ju Cho et al.   MOLECULES AND CELLS

Global quantification of mammalian gene expression control

(2011) Björn Schwanhäusser et al.   NATURE

Metabolite profiling of Arabidopsis seedlings in response to exogenous sinalbin and sulfur deficiency

(2011) Jixiu Zhang et al.   PHYTOCHEMISTRY

Arabidopsis 3-Ketoacyl-CoA Thiolase-2 (KAT2), an Enzyme of Fatty Acid β-Oxidation, is Involved in ABA Signal Transduction

(2011) Tao Jiang et al.   PLANT AND CELL PHYSIOLOGY

Role of Reactive Oxygen Species in the Regulation of Arabidopsis Seed Dormancy

(2011) Juliette Leymarie et al.   PLANT AND CELL PHYSIOLOGY

Extending SILAC to Proteomics of Plant Cell Lines

(2011) Wolfgang Schütz et al.   PLANT CELL

Functional Network Construction inArabidopsisUsing Rule-Based Machine Learning on Large-Scale Data Sets

(2011) George W. Bassel et al.   PLANT CELL

Distinct Roles of Protein Disulfide Isomerase and P5 Sulfhydryl Oxidoreductases in Multiple Pathways for Oxidation of Structurally Diverse Storage Proteins in Rice

(2011) Yayoi Onda et al.   PLANT CELL

Targeted mRNA Oxidation Regulates Sunflower Seed Dormancy Alleviation during Dry After-Ripening

(2011) Jérémie Bazin et al.   PLANT CELL

Degradation of seed mucilage by soil microflora promotes early seedling growth of a desert sand dune plant

(2011) XUEJUN YANG et al.   PLANT CELL AND ENVIRONMENT

A mitochondrial GABA permease connects the GABA shunt and the TCA cycle, and is essential for normal carbon metabolism

(2011) Simon Michaeli et al.   PLANT JOURNAL

In-Depth Temporal Transcriptome Profiling Reveals a Crucial Developmental Switch with Roles for RNA Processing and Organelle Metabolism That Are Essential for Germination in Arabidopsis

(2011) R. Narsai et al.   PLANT PHYSIOLOGY

Mapping Salinity Tolerance during Arabidopsis thaliana Germination and Seedling Growth

(2011) Leah DeRose-Wilson et al.   PLoS One

The Achene Mucilage Hydrated in Desert Dew Assists Seed Cells in Maintaining DNA Integrity: Adaptive Strategy of Desert Plant Artemisia sphaerocephala

(2011) Xuejun Yang et al.   PLoS One

Reboot the system thanks to protein post-translational modifications and proteome diversity: How quiescent seeds restart their metabolism to prepare seedling establishment

(2011) Erwann Arc et al.   PROTEOMICS

Proteomics reveals potential biomarkers of seed vigor in sugarbeet

(2011) Julie Catusse et al.   PROTEOMICS

Tight translational control by the initiation factors eIF4E and eIF(iso)4E is required for maize seed germination

(2011) Tzvetanka D. Dinkova et al.   SEED SCIENCE RESEARCH

Germination variation in Arabidopsis thaliana accessions under moderate osmotic and salt stresses

(2010) Augusto J. Vallejo et al.   ANNALS OF BOTANY

Germination, Postgermination Adaptation, and Species Ecological Ranges

(2010) Kathleen Donohue et al.   Annual Review of Ecology Evolution and Systematics

The immunoproteasome, the 20S proteasome and the PA28αβ proteasome regulator are oxidative-stress-adaptive proteolytic complexes

(2010) Andrew M. Pickering et al.   BIOCHEMICAL JOURNAL

Arabidopsis seed secrets unravelled after a decade of genetic and omics-driven research

(2010) Helen North et al.   PLANT JOURNAL

Genome-wide analysis of endogenous abscisic acid-mediated transcription in dry and imbibed seeds of Arabidopsis using tiling arrays

(2010) Masanori Okamoto et al.   PLANT JOURNAL

Stored and neosynthesized mRNA in Arabidopsis seeds: effects of cycloheximide and controlled deterioration treatment on the resumption of transcription during imbibition

(2010) Mitsuhiro Kimura et al.   PLANT MOLECULAR BIOLOGY

Functional Analysis of the Group 4 Late Embryogenesis Abundant Proteins Reveals Their Relevance in the Adaptive Response during Water Deficit in Arabidopsis

(2010) Yadira Olvera-Carrillo et al.   PLANT PHYSIOLOGY

Overexpression of microRNA395c or 395e affects differently the seed germination of Arabidopsis thaliana under stress conditions

(2010) Joo Yeol Kim et al.   PLANTA

Natural Variation in Arabidopsis thaliana Revealed a Genetic Network Controlling Germination Under Salt Stress

(2010) Navot Galpaz et al.   PLoS One

Role of plant glyoxylate reductases during stress: a hypothesis

(2009) Wendy L. Allan et al.   BIOCHEMICAL JOURNAL

Molecular and functional characterization of the plastid-localized Phosphoenolpyruvate enolase (ENO1) fromArabidopsis thaliana

(2009) Veena Prabhakar et al.   FEBS LETTERS

Nitrile-specifier Proteins Involved in Glucosinolate Hydrolysis inArabidopsis thaliana

(2009) Ralph Kissen et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Evidence for the Existence in Arabidopsis thaliana of the Proteasome Proteolytic Pathway

(2009) Cécile Polge et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Germination of Arabidopsis thaliana seeds is not completed as a result of elongation of the radicle but of the adjacent transition zone and lower hypocotyl

(2009) Elwira Sliwinska et al.   JOURNAL OF EXPERIMENTAL BOTANY

Post-Translational Regulation of AtFER2 Ferritin in Response to Intracellular Iron Trafficking during Fruit Development in Arabidopsis

(2009) Karl Ravet et al.   Molecular Plant

Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis

(2009) Maria Piques et al.   Molecular Systems Biology

Plastidial glycolysis in developing Arabidopsis embryos

(2009) Vasilios M. E. Andriotis et al.   NEW PHYTOLOGIST

Evolution of nitrilases in glucosinolate-containing plants

(2009) Tim Janowitz et al.   PHYTOCHEMISTRY

Vacuolar Processing Enzyme plays an Essential Role in the Crystalline Structure of Glutelin in Rice Seed

(2009) Toshihiro Kumamaru et al.   PLANT AND CELL PHYSIOLOGY

Seed Storage Oil Mobilization

(2008) Ian A. Graham   Annual Review of Plant Biology

From intracellular signaling networks to cell death: the dual role of reactive oxygen species in seed physiology

(2008) Christophe Bailly et al.   COMPTES RENDUS BIOLOGIES

Identification and characterization of a plastid-localized Arabidopsis glyoxylate reductase isoform: comparison with a cytosolic isoform and implications for cellular redox homeostasis and aldehyde detoxification

(2008) Jeffrey P. Simpson et al.   JOURNAL OF EXPERIMENTAL BOTANY

Arabidopsis Protein Disulfide Isomerase-5 Inhibits Cysteine Proteases during Trafficking to Vacuoles before Programmed Cell Death of the Endothelium in Developing Seeds

(2008) C. Andeme Ondzighi et al.   PLANT CELL

NAI2 Is an Endoplasmic Reticulum Body Component That Enables ER Body Formation in Arabidopsis thaliana

(2008) K. Yamada et al.   PLANT CELL

Analysis of the Arabidopsis O-Acetylserine(thiol)lyase Gene Family Demonstrates Compartment-Specific Differences in the Regulation of Cysteine Synthesis

(2008) C. Heeg et al.   PLANT CELL

A subtilisin-like serine protease essential for mucilage release from Arabidopsis seed coats

(2008) Carsten Rautengarten et al.   PLANT JOURNAL

Ferritins control interaction between iron homeostasis and oxidative stress in Arabidopsis

(2008) Karl Ravet et al.   PLANT JOURNAL

Proteome-Wide Characterization of Seed Aging in Arabidopsis: A Comparison between Artificial and Natural Aging Protocols

(2008) L. Rajjou et al.   PLANT PHYSIOLOGY

Mapping methyl jasmonate-mediated transcriptional reprogramming of metabolism and cell cycle progression in cultured Arabidopsis cells

(2008) L. Pauwels et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-Scale Proteomics Reveals Arabidopsis thaliana Gene Models and Proteome Dynamics

(2008) K. Baerenfaller et al.   SCIENCE

l-Ascorbate biosynthesis in higher plants: the role of VTC2

(2008) Carole L. Linster et al.   TRENDS IN PLANT SCIENCE

Analysis of Natural Allelic Variation Controlling Arabidopsis thaliana Seed Germinability in Response to Cold and Dark: Identification of Three Major Quantitative Trait Loci

(2007) Ping-Hong Meng et al.   Molecular Plant

Post-genomics dissection of seed dormancy and germination

(2007) Michael J. Holdsworth et al.   TRENDS IN PLANT SCIENCE