Preparation of cfMeDIP-seq libraries for methylome profiling of plasma cell-free DNA
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Preparation of cfMeDIP-seq libraries for methylome profiling of plasma cell-free DNA
Authors
Keywords
-
Journal
Nature Protocols
Volume 14, Issue 10, Pages 2749-2780
Publisher
Springer Science and Business Media LLC
Online
2019-08-31
DOI
10.1038/s41596-019-0202-2
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- OUP accepted manuscript
- (2018) BIOINFORMATICS
- A reassessment of DNA-immunoprecipitation-based genomic profiling
- (2018) Antonio Lentini et al. NATURE METHODS
- MeDEStrand: an improved method to infer genome-wide absolute methylation levels from DNA enrichment data
- (2018) Jingting Xu et al. BMC BIOINFORMATICS
- Sensitive tumour detection and classification using plasma cell-free DNA methylomes
- (2018) Shu Yi Shen et al. NATURE
- Application of Cell-free DNA Analysis to Cancer Treatment
- (2018) Ryan B. Corcoran et al. NEW ENGLAND JOURNAL OF MEDICINE
- Monitoring of Serum DNA Methylation as an Early Independent Marker of Response and Survival in Metastatic Breast Cancer: TBCRC 005 Prospective Biomarker Study
- (2017) Kala Visvanathan et al. JOURNAL OF CLINICAL ONCOLOGY
- Origins, structures, and functions of circulating DNA in oncology
- (2016) A. R. Thierry et al. CANCER AND METASTASIS REVIEWS
- Integrated digital error suppression for improved detection of circulating tumor DNA
- (2016) Aaron M Newman et al. NATURE BIOTECHNOLOGY
- QSEA—modelling of genome-wide DNA methylation from sequencing enrichment experiments
- (2016) Matthias Lienhard et al. NUCLEIC ACIDS RESEARCH
- The Long and Short of Circulating Cell-Free DNA and the Ins and Outs of Molecular Diagnostics
- (2016) Peiyong Jiang et al. TRENDS IN GENETICS
- Liquid Biopsies: Genotyping Circulating Tumor DNA
- (2014) Luis A. Diaz et al. JOURNAL OF CLINICAL ONCOLOGY
- Detecting ultralow-frequency mutations by Duplex Sequencing
- (2014) Scott R Kennedy et al. Nature Protocols
- BayMeth: improved DNA methylation quantification for affinity capture sequencing data using a flexible Bayesian approach
- (2014) Andrea Riebler et al. GENOME BIOLOGY
- MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments
- (2013) Matthias Lienhard et al. BIOINFORMATICS
- Dynamic DNA methylation across diverse human cell lines and tissues
- (2013) K. E. Varley et al. GENOME RESEARCH
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Methylome analysis using MeDIP-seq with low DNA concentrations
- (2012) Oluwatosin Taiwo et al. Nature Protocols
- Detection of aberrant promoter methylation of GSTP1, RASSF1A, and RARβ2 in serum DNA of patients with breast cancer by a newly established one-step methylation-specific PCR assay
- (2011) Noriaki Yamamoto et al. BREAST CANCER RESEARCH AND TREATMENT
- Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling
- (2011) Hongcang Gu et al. Nature Protocols
- Cell-free DNA in the blood as a solid tumor biomarker—A critical appraisal of the literature
- (2010) Klaus Jung et al. CLINICA CHIMICA ACTA
- Analysis of the Size Distributions of Fetal and Maternal Cell-Free DNA by Paired-End Sequencing
- (2010) H. C. Fan et al. CLINICAL CHEMISTRY
- Epigenetic modifications as therapeutic targets
- (2010) Theresa K Kelly et al. NATURE BIOTECHNOLOGY
- Epigenetic modifications in pluripotent and differentiated cells
- (2010) Alexander Meissner NATURE BIOTECHNOLOGY
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores
- (2009) Rafael A Irizarry et al. NATURE GENETICS
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now