The human gut chemical landscape predicts microbe-mediated biotransformation of foods and drugs
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Title
The human gut chemical landscape predicts microbe-mediated biotransformation of foods and drugs
Authors
Keywords
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Journal
eLife
Volume 8, Issue -, Pages -
Publisher
eLife Sciences Publications, Ltd
Online
2019-06-11
DOI
10.7554/elife.42866
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Note: Only part of the references are listed.- Microbiota and metabolism: what's new in 2018?
- (2018) Alexis Bretin et al. AMERICAN JOURNAL OF PHYSIOLOGY-ENDOCRINOLOGY AND METABOLISM
- Tomatidine Is a Lead Antibiotic Molecule That Targets Staphylococcus aureus ATP Synthase Subunit C
- (2018) Maxime Lamontagne Boulet et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- N -methylation in amino acids and peptides: Scope and limitations
- (2018) Anamika Sharma et al. BIOPOLYMERS
- In silico prediction of potential chemical reactions mediated by human enzymes
- (2018) Myeong-Sang Yu et al. BMC BIOINFORMATICS
- The Intestinal Microbiota in Colorectal Cancer
- (2018) Herbert Tilg et al. CANCER CELL
- Sphingolipids in host–microbial interactions
- (2018) Stacey L Heaver et al. CURRENT OPINION IN MICROBIOLOGY
- Guidelines for the diagnosis and treatment of male-pattern and female-pattern hair loss, 2017 version
- (2018) Motomu Manabe et al. JOURNAL OF DERMATOLOGY
- Efficacy and safety of saxagliptin in patients with type 2 diabetes: A systematic review and meta-analysis
- (2018) Peng Men et al. PLoS One
- Discovery and characterization of a prevalent human gut bacterial enzyme sufficient for the inactivation of a family of plant toxins
- (2018) Nitzan Koppel et al. eLife
- RetroRules: a database of reaction rules for engineering biology
- (2018) Thomas Duigou et al. NUCLEIC ACIDS RESEARCH
- Colonocyte metabolism shapes the gut microbiota
- (2018) Yael Litvak et al. SCIENCE
- Microbiome-Modulated Metabolites at the Interface of Host Immunity
- (2017) Eran Blacher et al. JOURNAL OF IMMUNOLOGY
- Gut microbiota modulation of chemotherapy efficacy and toxicity
- (2017) James L. Alexander et al. Nature Reviews Gastroenterology & Hepatology
- Chemical transformation of xenobiotics by the human gut microbiota
- (2017) Nitzan Koppel et al. SCIENCE
- An Atlas of β-Glucuronidases in the Human Intestinal Microbiome
- (2017) Rebecca M. Pollet et al. STRUCTURE
- Gut microbiome interactions with drug metabolism, efficacy, and toxicity
- (2017) Ian D. Wilson et al. Translational Research
- In Vitro Antibacterial Activity of Unconjugated and Conjugated Bile Salts on Staphylococcus aureus
- (2017) Thippeswamy H. Sannasiddappa et al. Frontiers in Microbiology
- Analysis of Microbial Functions in the Rhizosphere Using a Metabolic-Network Based Framework for Metagenomics Interpretation
- (2017) Shany Ofaim et al. Frontiers in Microbiology
- Human microbiome signatures of differential colorectal cancer drug metabolism
- (2017) Leah Guthrie et al. npj Biofilms and Microbiomes
- A novel approach for the prediction of species-specific biotransformation of xenobiotic/drug molecules by the human gut microbiota
- (2017) Ashok K. Sharma et al. Scientific Reports
- Gut Microbiota, Inflammation, and Colorectal Cancer
- (2016) Caitlin A. Brennan et al. Annual Review of Microbiology
- Diet-induced extinctions in the gut microbiota compound over generations
- (2016) Erica D. Sonnenburg et al. NATURE
- The microbial pharmacists within us: a metagenomic view of xenobiotic metabolism
- (2016) Peter Spanogiannopoulos et al. NATURE REVIEWS MICROBIOLOGY
- ClassyFire: automated chemical classification with a comprehensive, computable taxonomy
- (2016) Yannick Djoumbou Feunang et al. Journal of Cheminformatics
- Gut Microbiota Profiling: Metabolomics Based Approach to Unravel Compounds Affecting Human Health
- (2016) Pamela Vernocchi et al. Frontiers in Microbiology
- Structure and Inhibition of Microbiome β-Glucuronidases Essential to the Alleviation of Cancer Drug Toxicity
- (2015) Bret D. Wallace et al. CHEMISTRY & BIOLOGY
- Using Corticosteroids to Reshape the Gut Microbiome
- (2015) Edmond Y. Huang et al. INFLAMMATORY BOWEL DISEASES
- DataWarrior: An Open-Source Program For Chemistry Aware Data Visualization And Analysis
- (2015) Thomas Sander et al. Journal of Chemical Information and Modeling
- The SIDER database of drugs and side effects
- (2015) Michael Kuhn et al. NUCLEIC ACIDS RESEARCH
- PubChem Substance and Compound databases
- (2015) Sunghwan Kim et al. NUCLEIC ACIDS RESEARCH
- Finasteride Concentrations and Prostate Cancer Risk: Results from the Prostate Cancer Prevention Trial
- (2015) Cindy H. Chau et al. PLoS One
- Why is Tanimoto index an appropriate choice for fingerprint-based similarity calculations?
- (2015) Dávid Bajusz et al. Journal of Cheminformatics
- Systematic genome assessment of B-vitamin biosynthesis suggests co-operation among gut microbes
- (2015) Stefanía Magnúsdóttir et al. Frontiers in Genetics
- In VitroAnalysis of Finasteride Activity against Candida albicans Urinary Biofilm Formation and Filamentation
- (2014) Alba A. Chavez-Dozal et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Gut Microbial Metabolism Drives Transformation of Msh2-Deficient Colon Epithelial Cells
- (2014) Antoaneta Belcheva et al. CELL
- The Integrative Human Microbiome Project: Dynamic Analysis of Microbiome-Host Omics Profiles during Periods of Human Health and Disease
- (2014) Cell Host & Microbe
- The contributory role of gut microbiota in cardiovascular disease
- (2014) W.H. Wilson Tang et al. JOURNAL OF CLINICAL INVESTIGATION
- The Devil Lies in the Details: How Variations in Polysaccharide Fine-Structure Impact the Physiology and Evolution of Gut Microbes
- (2014) Eric C. Martens et al. JOURNAL OF MOLECULAR BIOLOGY
- Microbial genomic analysis reveals the essential role of inflammation in bacteria-induced colorectal cancer
- (2014) Janelle C. Arthur et al. Nature Communications
- Identification of New Metabolites of Bacterial Transformation of Indole by Gas Chromatography-Mass Spectrometry and High Performance Liquid Chromatography
- (2014) Pankaj Kumar Arora et al. International Journal of Analytical Chemistry
- The Novel BacterialN-Demethylase PdmAB Is Responsible for the Initial Step ofN,N-Dimethyl-Substituted Phenylurea Herbicide Degradation
- (2013) Tao Gu et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- β-Glucuronidase from Lactobacillus brevis useful for baicalin hydrolysis belongs to glycoside hydrolase family 30
- (2013) Haruko Sakurama et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Tryptophan Catabolites from Microbiota Engage Aryl Hydrocarbon Receptor and Balance Mucosal Reactivity via Interleukin-22
- (2013) Teresa Zelante et al. IMMUNITY
- Dysbiosis Signature of Fecal Microbiota in Colorectal Cancer Patients
- (2013) Na Wu et al. MICROBIAL ECOLOGY
- Intestinal microbiota metabolism of l-carnitine, a nutrient in red meat, promotes atherosclerosis
- (2013) Robert A Koeth et al. NATURE MEDICINE
- DrugBank 4.0: shedding new light on drug metabolism
- (2013) Vivian Law et al. NUCLEIC ACIDS RESEARCH
- phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
- (2013) Paul J. McMurdie et al. PLoS One
- The Microbial Metabolites, Short-Chain Fatty Acids, Regulate Colonic Treg Cell Homeostasis
- (2013) P. M. Smith et al. SCIENCE
- Predicting and Manipulating Cardiac Drug Inactivation by the Human Gut Bacterium Eggerthella lenta
- (2013) H. J. Haiser et al. SCIENCE
- Melamine-Induced Renal Toxicity Is Mediated by the Gut Microbiota
- (2013) X. Zheng et al. Science Translational Medicine
- Synthesis and antimicrobial activity of novel oxysterols from lanosterol
- (2013) Bapurao B. Shingate et al. TETRAHEDRON
- Chemistry and Biological Activities of Flavonoids: An Overview
- (2013) Shashank Kumar et al. TheScientificWorldJOURNAL
- Prediction of Substrate-Enzyme-Product Interaction Based on Molecular Descriptors and Physicochemical Properties
- (2013) Bing Niu et al. Biomed Research International
- Self-organizing ontology of biochemically relevant small molecules
- (2012) Leonid L Chepelev et al. BMC BIOINFORMATICS
- Novel, Highly Specific N-Demethylases Enable Bacteria To Live on Caffeine and Related Purine Alkaloids
- (2012) R. M. Summers et al. JOURNAL OF BACTERIOLOGY
- Galacto-Oligosaccharides Have Prebiotic Activity in a Dynamic In Vitro Colon Model Using a 13C-Labeling Technique
- (2012) Annet J. H. Maathuis et al. JOURNAL OF NUTRITION
- The Microbiome and Butyrate Regulate Energy Metabolism and Autophagy in the Mammalian Colon
- (2011) Dallas R. Donohoe et al. Cell Metabolism
- Dysbiosis of the faecal microbiota in patients with Crohn's disease and their unaffected relatives
- (2011) M. Joossens et al. GUT
- Bifidobacteria can protect from enteropathogenic infection through production of acetate
- (2011) Shinji Fukuda et al. NATURE
- IMG: the integrated microbial genomes database and comparative analysis system
- (2011) V. M. Markowitz et al. NUCLEIC ACIDS RESEARCH
- Does Finasteride Have a Preventive Effect on Chronic Bacterial Prostatitis? Pilot Study Using an Animal Model
- (2011) Choong Bum Lee et al. UROLOGIA INTERNATIONALIS
- Production of Indole from L-Tryptophan and Effects of These Compounds on Biofilm Formation by Fusobacterium nucleatum ATCC 25586
- (2010) T. Sasaki-Imamura et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Molecular signatures-based prediction of enzyme promiscuity
- (2010) Pablo Carbonell et al. BIOINFORMATICS
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- When is Chemical Similarity Significant? The Statistical Distribution of Chemical Similarity Scores and Its Extreme Values
- (2010) Pierre Baldi et al. Journal of Chemical Information and Modeling
- The anti-inflammatory and immunosuppressive effects of glucocorticoids, recent developments and mechanistic insights
- (2010) Agnes E. Coutinho et al. MOLECULAR AND CELLULAR ENDOCRINOLOGY
- Alleviating Cancer Drug Toxicity by Inhibiting a Bacterial Enzyme
- (2010) B. D. Wallace et al. SCIENCE
- New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
- (2010) Stéphane Guindon et al. SYSTEMATIC BIOLOGY
- Pharmacometabonomic identification of a significant host-microbiome metabolic interaction affecting human drug metabolism
- (2009) T. A. Clayton et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Antimicrobial Activity of Dexamethasone and Its Combination With N-Chlorotaurine
- (2008) Andreas Neher et al. ARCHIVES OF OTOLARYNGOLOGY-HEAD & NECK SURGERY
- Mucosal Glycan Foraging Enhances Fitness and Transmission of a Saccharolytic Human Gut Bacterial Symbiont
- (2008) Eric C. Martens et al. Cell Host & Microbe
- Functional and comparative metagenomic analysis of bile salt hydrolase activity in the human gut microbiome
- (2008) B. V. Jones et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Drug Target Identification Using Side-Effect Similarity
- (2008) M. Campillos et al. SCIENCE
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