Identification and functional prediction of cold-related long non-coding RNA (lncRNA) in grapevine
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Title
Identification and functional prediction of cold-related long non-coding RNA (lncRNA) in grapevine
Authors
Keywords
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Journal
Scientific Reports
Volume 9, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-04-29
DOI
10.1038/s41598-019-43269-5
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Note: Only part of the references are listed.- An apple NAC transcription factor negatively regulates cold tolerance via CBF-dependent pathway
- (2018) Jian-Ping An et al. JOURNAL OF PLANT PHYSIOLOGY
- Genome-Wide Characterization of bHLH Genes in Grape and Analysis of their Potential Relevance to Abiotic Stress Tolerance and Secondary Metabolite Biosynthesis
- (2018) Pengfei Wang et al. Frontiers in Plant Science
- Transposable elements (TEs) contribute to stress-related long intergenic noncoding RNAs in plants
- (2017) Dong Wang et al. PLANT JOURNAL
- Whole transcriptome sequencing of Pseudomonas syringae pv. actinidiae-infected kiwifruit plants reveals species-specific interaction between long non-coding RNA and coding genes
- (2017) Zupeng Wang et al. Scientific Reports
- The lncRNAs involved in mouse airway allergic inflammation following induced pluripotent stem cell-mesenchymal stem cell treatment
- (2017) Shu-Yue Wang et al. Stem Cell Research & Therapy
- Genome-wide identification and functional prediction of cold and/or drought-responsive lncRNAs in cassava
- (2017) Shuxia Li et al. Scientific Reports
- Systematic characterization of novel lncRNAs responding to phosphate starvation in Arabidopsis thaliana
- (2016) Jiapei Yuan et al. BMC GENOMICS
- High-Resolution Expression Map of the Arabidopsis Root Reveals Alternative Splicing and lincRNA Regulation
- (2016) Song Li et al. DEVELOPMENTAL CELL
- Genome-Wide Analysis of Long Noncoding RNAs and Their Responses to Drought Stress in Cotton (Gossypium hirsutum L.)
- (2016) Xuke Lu et al. PLoS One
- A novel system for evaluating drought–cold tolerance of grapevines using chlorophyll fluorescence
- (2015) Lingye Su et al. BMC PLANT BIOLOGY
- Long non-coding RNAs and their functions in plants
- (2015) Julia A Chekanova CURRENT OPINION IN PLANT BIOLOGY
- New candidate genes for the fine regulation of the colour of grapes
- (2015) Laura Costantini et al. JOURNAL OF EXPERIMENTAL BOTANY
- Regulation of flavonol content and composition in (Syrah×Pinot Noir) mature grapes: integration of transcriptional profiling and metabolic quantitative trait locus analyses
- (2015) Giulia Malacarne et al. JOURNAL OF EXPERIMENTAL BOTANY
- StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
- (2015) Mihaela Pertea et al. NATURE BIOTECHNOLOGY
- HISAT: a fast spliced aligner with low memory requirements
- (2015) Daehwan Kim et al. NATURE METHODS
- Discovery and annotation of long noncoding RNAs
- (2015) John S Mattick et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Environmental perception and epigenetic memory: mechanistic insight throughFLC
- (2015) Scott Berry et al. PLANT JOURNAL
- Discovery and annotation of long noncoding RNAs
- (2015) John S Mattick et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Genome-wide analysis of tomato long non-coding RNAs and identification as endogenous target mimic for microRNA in response to TYLCV infection
- (2015) Jinyan Wang et al. Scientific Reports
- Day and night heat stress trigger different transcriptomic responses in green and ripening grapevine (vitis vinifera) fruit
- (2014) Markus Rienth et al. BMC PLANT BIOLOGY
- Long Noncoding RNAs in Cell-Fate Programming and Reprogramming
- (2014) Ryan A. Flynn et al. Cell Stem Cell
- Long Noncoding RNA Modulates Alternative Splicing Regulators in Arabidopsis
- (2014) Florian Bardou et al. DEVELOPMENTAL CELL
- Genome-wide identification and functional prediction of novel and drought-responsive lincRNAs in Populus trichocarpa
- (2014) Peng Shuai et al. JOURNAL OF EXPERIMENTAL BOTANY
- RNA-directed DNA methylation: an epigenetic pathway of increasing complexity
- (2014) Marjori A. Matzke et al. NATURE REVIEWS GENETICS
- Characterization of stress-responsive lncRNAs inArabidopsis thalianaby integrating expression, epigenetic and structural features
- (2014) Chao Di et al. PLANT JOURNAL
- Arabidopsis noncoding RNA mediates control of photomorphogenesis by red light
- (2014) Y. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genome-wide discovery and characterization of maize long non-coding RNAs
- (2014) Lin Li et al. GENOME BIOLOGY
- Long noncoding RNAs: New regulators in plant development
- (2013) Yu-Chan Zhang et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- PLncDB: plant long non-coding RNA database
- (2013) J. Jin et al. BIOINFORMATICS
- Regulatory mechanisms of long noncoding RNAs in vertebrate central nervous system development and function
- (2013) J.L. Knauss et al. NEUROSCIENCE
- Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts
- (2013) Liang Sun et al. NUCLEIC ACIDS RESEARCH
- Pfam: the protein families database
- (2013) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Data, information, knowledge and principle: back to metabolism in KEGG
- (2013) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- Identification of a Novel LEA Protein Involved in Freezing Tolerance in Wheat
- (2013) Kentaro Sasaki et al. PLANT AND CELL PHYSIOLOGY
- Widespread Long Noncoding RNAs as Endogenous Target Mimics for MicroRNAs in Plants
- (2013) H.-J. Wu et al. PLANT PHYSIOLOGY
- Transcription of Two Long Noncoding RNAs Mediates Mating-Type Control of Gametogenesis in Budding Yeast
- (2012) Folkert J. van Werven et al. CELL
- Genome-Wide Analysis Uncovers Regulation of Long Intergenic Noncoding RNAs in Arabidopsis
- (2012) J. Liu et al. PLANT CELL
- Flavonoid biosynthesis-related genes in grape skin are differentially regulated by temperature and light conditions
- (2012) Akifumi Azuma et al. PLANTA
- A long noncoding RNA regulates photoperiod-sensitive male sterility, an essential component of hybrid rice
- (2012) J. Ding et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants
- (2011) Basel Khraiwesh et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Signal transduction during cold, salt, and drought stresses in plants
- (2011) Guo-Tao Huang et al. MOLECULAR BIOLOGY REPORTS
- Male gametophyte-specific WRKY34 transcription factor mediates cold sensitivity of mature pollen in Arabidopsis
- (2010) Changsong Zou et al. JOURNAL OF EXPERIMENTAL BOTANY
- Non-Protein-Coding RNAs and their Interacting RNA-Binding Proteins in the Plant Cell Nucleus
- (2010) Celine Charon et al. Molecular Plant
- An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA methylation
- (2010) Zhihuan Gao et al. NATURE
- Molecular Basis of Plant Cold Acclimation: Insights Gained from Studying the CBF Cold Response Pathway
- (2010) M. F. Thomashow PLANT PHYSIOLOGY
- Vernalization-Mediated Epigenetic Silencing by a Long Intronic Noncoding RNA
- (2010) J. B. Heo et al. SCIENCE
- DEGseq: an R package for identifying differentially expressed genes from RNA-seq data
- (2009) Likun Wang et al. BIOINFORMATICS
- Evolution and Functions of Long Noncoding RNAs
- (2009) Chris P. Ponting et al. CELL
- RNA-mediated chromatin-based silencing in plants
- (2009) Marjori Matzke et al. CURRENT OPINION IN CELL BIOLOGY
- Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
- (2009) Mitchell Guttman et al. NATURE
- RNAplex: a fast tool for RNA–RNA interaction search
- (2008) Hakim Tafer et al. BIOINFORMATICS
- Noncoding Transcription by RNA Polymerase Pol IVb/Pol V Mediates Transcriptional Silencing of Overlapping and Adjacent Genes
- (2008) Andrzej T. Wierzbicki et al. CELL
- miRNA modulation of the cellular stress response
- (2008) Imran A Babar et al. Future Oncology
- Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses
- (2008) B. Ben Amor et al. GENOME RESEARCH
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