Transcriptomic profiling and analysis of differentially expressed genes in asparagus bean (Vigna unguiculata ssp. sesquipedalis) under salt stress

Seedling salt tolerance for above ground-related traits in cowpea (Vigna unguiculata (L.) Walp)

(2019) Lingdi Dong et al.   EUPHYTICA

Responses to Systemic Nitrogen Signaling in Arabidopsis Roots Involvetrans-Zeatin in Shoots

(2018) Arthur Poitout et al.   PLANT CELL

Salicylic acid-independent role of NPR1 is required for protection from proteotoxic stress in the plant endoplasmic reticulum

(2018) Ya-Shiuan Lai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Polycomb Repressive Complex 2 attenuates the very high expression of the Arabidopsis gene NRT2.1

(2018) Fanny Bellegarde et al.   Scientific Reports

Elucidating the molecular mechanisms mediating plant salt-stress responses

(2017) Yongqing Yang et al.   NEW PHYTOLOGIST

The C2H2 zinc-finger protein SlZF3 regulates AsA synthesis and salt tolerance by interacting with CSN5B

(2017) Ying Li et al.   PLANT BIOTECHNOLOGY JOURNAL

Plant-Specific Histone Deacetylases HDT1/2 Regulate GIBBERELLIN 2-OXIDASE2 Expression to Control Arabidopsis Root Meristem Cell Number

(2017) Huchen Li et al.   PLANT CELL

Activation of gibberellin 20-oxidase 2 undermines auxin-dependent root and root hair growth in NaCl-stressed Arabidopsis seedlings

(2017) Shufang Lv et al.   PLANT GROWTH REGULATION

Genome resources for climate-resilient cowpea, an essential crop for food security

(2017) María Muñoz-Amatriaín et al.   PLANT JOURNAL

Association analysis of salt tolerance in cowpea (Vigna unguiculata (L.) Walp) at germination and seedling stages

(2017) Waltram Ravelombola et al.   THEORETICAL AND APPLIED GENETICS

A High Density Genetic Map Derived from RAD Sequencing and Its Application in QTL Analysis of Yield-Related Traits in Vigna unguiculata

(2017) Lei Pan et al.   Frontiers in Plant Science

The Role of Na+ and K+ Transporters in Salt Stress Adaptation in Glycophytes

(2017) Dekoum V. M. Assaha et al.   Frontiers in Physiology

EIN3 and SOS2 synergistically modulate plant salt tolerance

(2017) Ruidang Quan et al.   Scientific Reports

Soybean Na+/H+ antiporter GmsSOS1 enhances antioxidant enzyme activity and reduces Na+ accumulation in Arabidopsis and yeast cells under salt stress

(2016) Xiufang Zhao et al.   ACTA PHYSIOLOGIAE PLANTARUM

Effects of drought and salt-stresses on gene expression in Caragana korshinskii seedlings revealed by RNA-seq

(2016) Shaofeng Li et al.   BMC GENOMICS

Tissue tolerance: an essential but elusive trait for salt-tolerant crops

(2016) Rana Munns et al.   FUNCTIONAL PLANT BIOLOGY

KEGG: new perspectives on genomes, pathways, diseases and drugs

(2016) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Genomic regions, cellular components and gene regulatory basis underlying pod length variations in cowpea (V. unguiculata L. Walp)

(2016) Pei Xu et al.   PLANT BIOTECHNOLOGY JOURNAL

A SNARE-Like Superfamily Protein SbSLSP from the Halophyte Salicornia brachiata Confers Salt and Drought Tolerance by Maintaining Membrane Stability, K+/Na+ Ratio, and Antioxidant Machinery

(2016) Dinkar Singh et al.   Frontiers in Plant Science

Genetic regulation of salt stress tolerance revealed by RNA-Seq in cotton diploid wild species, Gossypium davidsonii

(2016) Feng Zhang et al.   Scientific Reports

Transcriptome profiling of the salt-stress response in Triticum aestivum cv. Kharchia Local

(2016) Etika Goyal et al.   Scientific Reports

RNA-seq for gene identification and transcript profiling in relation to root growth of bermudagrass (Cynodon dactylon) under salinity stress

(2015) Longxing Hu et al.   BMC GENOMICS

Mechanisms of oxidative stress in plants: From classical chemistry to cell biology

(2015) Vadim Demidchik   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Arabidopsis Qc-SNARE gene AtSFT12 is involved in salt and osmotic stress responses and Na+ accumulation in vacuoles

(2015) Vaishali N. Tarte et al.   PLANT CELL REPORTS

Salicylic acid in plant salinity stress signalling and tolerance

(2015) Maheswari Jayakannan et al.   PLANT GROWTH REGULATION

Genome-Wide Analysis of C2H2 Zinc-Finger Family Transcription Factors and Their Responses to Abiotic Stresses in Poplar (Populus trichocarpa)

(2015) Quangang Liu et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Legume Crops Phylogeny and Genetic Diversity for Science and Breeding

(2014) Petr Smýkal et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Salt resistant crop plants

(2014) Stuart J Roy et al.   CURRENT OPINION IN BIOTECHNOLOGY

Complex phylogeny and gene expression patterns of members of the NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family (NPF) in wheat

(2014) Peter Buchner et al.   JOURNAL OF EXPERIMENTAL BOTANY

Regulation of potassium transport in plants under hostile conditions: implications for abiotic and biotic stress tolerance

(2014) Sergey Shabala et al.   PHYSIOLOGIA PLANTARUM

On the salty side of life: molecular, physiological and anatomical adaptation and acclimation of trees to extreme habitats

(2014) ANDREA POLLE et al.   PLANT CELL AND ENVIRONMENT

Comparative Functional Analysis of Wheat (Triticum aestivum) Zinc Finger-Containing Glycine-Rich RNA-Binding Proteins in Response to Abiotic Stresses

(2014) Tao Xu et al.   PLoS One

Plant salt-tolerance mechanisms

(2014) Ulrich Deinlein et al.   TRENDS IN PLANT SCIENCE

PlantTFcat: an online plant transcription factor and transcriptional regulator categorization and analysis tool

(2013) Xinbin Dai et al.   BMC BIOINFORMATICS

Nitrogen acquisition by roots: physiological and developmental mechanisms ensuring plant adaptation to a fluctuating resource

(2013) Philippe Nacry et al.   PLANT AND SOIL

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

An SSR-based linkage map of yardlong bean (Vigna unguiculata (L.) Walp. subsp. unguiculata Sesquipedalis Group) and QTL analysis of pod length

(2012) Alisa Kongjaimun et al.   GENOME

Salt Stress Triggers Phosphorylation of the Arabidopsis Vacuolar K+ Channel TPK1 by Calcium-Dependent Protein Kinases (CDPKs)

(2012) Andreas Latz et al.   Molecular Plant

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

GsVAMP72, a novel Glycine soja R-SNARE protein, is involved in regulating plant salt tolerance and ABA sensitivity

(2012) Xiaoli Sun et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

(2011) S Samuel Yang et al.   BMC GENOMICS

Gene Expression Profiling of Plants under Salt Stress

(2011) A. Jamil et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Phylogenetic Study of Plant Q-type C2H2 Zinc Finger Proteins and Expression Analysis of Poplar Genes in Response to Osmotic, Cold and Mechanical Stresses

(2011) D. Gourcilleau et al.   DNA RESEARCH

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Reduced expression of the v-SNAREs AtVAMP71/AtVAMP7C gene family in Arabidopsis reduces drought tolerance by suppression of abscisic acid-dependent stomatal closure

(2010) Yehoram Leshem et al.   JOURNAL OF EXPERIMENTAL BOTANY

Advancing RNA-Seq analysis

(2010) Brian J Haas et al.   NATURE BIOTECHNOLOGY

agriGO: a GO analysis toolkit for the agricultural community

(2010) Zhou Du et al.   NUCLEIC ACIDS RESEARCH

The Arabidopsis basic leucine zipper transcription factor AtbZIP24 regulates complex transcriptional networks involved in abiotic stress resistance

(2009) Oksoon Yang et al.   GENE

Comparative Proteomic Analysis of Differentially Expressed Proteins in Shoots ofSalicornia europaeaunder Different Salinity

(2009) Xuchu Wang et al.   JOURNAL OF PROTEOME RESEARCH

Dynamic Aspects of Ion Accumulation by Vesicle Traffic Under Salt Stress in Arabidopsis

(2009) Kohei Hamaji et al.   PLANT AND CELL PHYSIOLOGY

Cold Shock Domain Proteins Affect Seed Germination and Growth of Arabidopsis thaliana Under Abiotic Stress Conditions

(2009) Su Jung Park et al.   PLANT AND CELL PHYSIOLOGY

Novel potato C2H2-type zinc finger protein gene, StZFP1, which responds to biotic and abiotic stress, plays a role in salt tolerance

(2009) Z.-D. Tian et al.   PLANT BIOLOGY

Making the most of drought and salinity transcriptomics

(2009) MICHAEL K. DEYHOLOS   PLANT CELL AND ENVIRONMENT

A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs

(2009) W. Muchero et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The DDF1 transcriptional activator upregulates expression of a gibberellin-deactivating gene,GA2ox7, under high-salinity stress in Arabidopsis

(2008) Hiroshi Magome et al.   PLANT JOURNAL

Functional characterization of Arabidopsis NaCl-inducible WRKY25 and WRKY33 transcription factors in abiotic stresses

(2008) Yuanqing Jiang et al.   PLANT MOLECULAR BIOLOGY