An identification protocol for ESBL-producing Gram-negative bacteria bloodstream infections using a MinION nanopore sequencer
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
An identification protocol for ESBL-producing Gram-negative bacteria bloodstream infections using a MinION nanopore sequencer
Authors
Keywords
-
Journal
JOURNAL OF MEDICAL MICROBIOLOGY
Volume 68, Issue 8, Pages 1219-1226
Publisher
Microbiology Society
Online
2019-06-25
DOI
10.1099/jmm.0.001024
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- DNA extraction from primary liquid blood cultures for bloodstream infection diagnosis using whole genome sequencing
- (2018) Luke W. Anson et al. JOURNAL OF MEDICAL MICROBIOLOGY
- Rapid identification of pathogens from positive blood culture bottles with the MinION nanopore sequencer
- (2018) Sae Ashikawa et al. JOURNAL OF MEDICAL MICROBIOLOGY
- Illumina short-read and MinION long-read WGS to characterize the molecular epidemiology of an NDM-1 Serratia marcescens outbreak in Romania
- (2017) H T T Phan et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Use of the Oxford Nanopore MinION sequencer for MLST genotyping of vancomycin-resistant enterococci
- (2017) N. Tarumoto et al. JOURNAL OF HOSPITAL INFECTION
- MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach
- (2017) Bonnie L. Brown et al. GigaScience
- A portable system for rapid bacterial composition analysis using a nanopore-based sequencer and laptop computer
- (2017) Satomi Mitsuhashi et al. Scientific Reports
- Identification of bacterial pathogens and antimicrobial resistance directly from clinical urines by nanopore-based metagenomic sequencing
- (2016) K. Schmidt et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database
- (2016) Baofeng Jia et al. NUCLEIC ACIDS RESEARCH
- Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinIONTM sequencing
- (2016) Minh Duc Cao et al. GigaScience
- Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer
- (2016) Alfonso Benítez-Páez et al. GigaScience
- Oxford Nanopore MinION Sequencing and Genome Assembly
- (2016) Hengyun Lu et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- Discovery of novel S. aureus autolysins and molecular engineering to enhance bacteriolytic activity
- (2015) Daniel C. Osipovitch et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Improved rapid and efficient method for Staphylococcus aureus DNA extraction from milk for identification of mastitis pathogens
- (2015) Hirotaka UNNO et al. JOURNAL OF VETERINARY MEDICAL SCIENCE
- Improved data analysis for the MinION nanopore sequencer
- (2015) Miten Jain et al. NATURE METHODS
- Clinical and Molecular Epidemiology of Extended-Spectrum Beta-Lactamase-Producing Klebsiella spp.: A Systematic Review and Meta-Analyses
- (2015) Tirza C. Hendrik et al. PLoS One
- Risk factors for acquisition of carbapenem resistant Enterobacteriaceae in an acute tertiary care hospital in Singapore
- (2015) Moi Lin Ling et al. Antimicrobial Resistance and Infection Control
- Bacterial and viral identification and differentiation by amplicon sequencing on the MinION nanopore sequencer
- (2015) Andy Kilianski et al. GigaScience
- Rapid Detection of -Lactamase-Hydrolyzing Extended-Spectrum Cephalosporins in Enterobacteriaceae by Use of the New Chromogenic Lacta Test
- (2014) M. I. Morosini et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Klebsiella pneumoniae Bloodstream Infection
- (2014) Nicolò Girometti et al. MEDICINE
- Antimicrobial Prophylaxis for Children with Vesicoureteral Reflux
- (2014) NEW ENGLAND JOURNAL OF MEDICINE
- The Comprehensive Antibiotic Resistance Database
- (2013) Andrew G. McArthur et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Evaluation of the Lacta Test, a Rapid Test Detecting Resistance to Third-Generation Cephalosporins in Clinical Strains of Enterobacteriaceae
- (2013) A. Renvoise et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Clinical epidemiology of the global expansion of Klebsiella pneumoniae carbapenemases
- (2013) L Silvia Munoz-Price et al. LANCET INFECTIOUS DISEASES
- Rapid Detection of Extended-Spectrum- -Lactamase-Producing Enterobacteriaceae
- (2012) P. Nordmann et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Evaluation of Methods for the Extraction and Purification of DNA from the Human Microbiome
- (2012) Sanqing Yuan et al. PLoS One
- Comparison of the MALDI Biotyper System Using Sepsityper Specimen Processing to Routine Microbiological Methods for Identification of Bacteria from Positive Blood Culture Bottles
- (2011) B. W. Buchan et al. JOURNAL OF CLINICAL MICROBIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now