Pan African phylogeography and palaeodistribution of rousettine fruit bats: Ecogeographic correlation with Pleistocene climate vegetation cycles

A global analysis of bats using automated comparative phylogeography uncovers a surprising impact of Pleistocene glaciation

(2018) Bryan C. Carstens et al.   JOURNAL OF BIOGEOGRAPHY

Spatial variability in species' potential distributions during the Last Glacial Maximum under different Global Circulation Models: Relevance in evolutionary biology

(2018) Lázaro Guevara et al.   JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH

Outstanding Challenges in the Transferability of Ecological Models

(2018) Katherine L. Yates et al.   TRENDS IN ECOLOGY & EVOLUTION

Gene sequence variations and expression patterns of mitochondrial genes are associated with the adaptive evolution of two Gynaephora species (Lepidoptera: Lymantriinae) living in different high-elevation environments

(2017) Qi-Lin Zhang et al.   GENE

UFBoot2: Improving the Ultrafast Bootstrap Approximation

(2017) Diep Thi Hoang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Habitat use, but not gene flow, is influenced by human activities in two ecotypes of Egyptian fruit bat (Rousettus aegyptiacus )

(2017) A. Centeno-Cuadros et al.   MOLECULAR ECOLOGY

StructureSelector : A web-based software to select and visualize the optimal number of clusters using multiple methods

(2017) Yu-Long Li et al.   Molecular Ecology Resources

Homo naledi and Pleistocene hominin evolution in subequatorial Africa

(2017) Lee R Berger et al.   eLife

SDMtoolbox 2.0: the next generation Python-based GIS toolkit for landscape genetic, biogeographic and species distribution model analyses

(2017) Jason L. Brown et al.   PeerJ

The nexus between forest fragmentation in Africa and Ebola virus disease outbreaks

(2017) Maria Cristina Rulli et al.   Scientific Reports

The Evolutionary History of the African Fruit Bats (Chiroptera: Pteropodidae)

(2016) Francisca Cunhaalmeida et al.   ACTA CHIROPTEROLOGICA

Genome-wide data reveal cryptic diversity and genetic introgression in an Oriental cynopterine fruit bat radiation

(2016) Balaji Chattopadhyay et al.   BMC EVOLUTIONARY BIOLOGY

Comparative phylogeography of African fruit bats (Chiroptera, Pteropodidae) provide new insights into the outbreak of Ebola virus disease in West Africa, 2014–2016

(2016) Alexandre Hassanin et al.   COMPTES RENDUS BIOLOGIES

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

The programstructuredoes not reliably recover the correct population structure when sampling is uneven: subsampling and new estimators alleviate the problem

(2016) Sebastien J. Puechmaille   Molecular Ecology Resources

Genetic consequences of population expansions and contractions in the common hippopotamus (Hippopotamus amphibius)since the Late Pleistocene

(2015) Céline Stoffel et al.   MOLECULAR ECOLOGY

popart: full-feature software for haplotype network construction

(2015) Jessica W. Leigh et al.   Methods in Ecology and Evolution

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Hidden diversity in Senegalese bats and associated findings in the systematics of the family Vespertilionidae

(2013) Darina Koubínová et al.   Frontiers in Zoology

Drivers of population genetic differentiation in the wild: isolation by dispersal limitation, isolation by adaptation and isolation by colonization

(2013) Luisa Orsini et al.   MOLECULAR ECOLOGY

Dynamics of Green Sahara Periods and Their Role in Hominin Evolution

(2013) Juan C. Larrasoaña et al.   PLoS One

Mitochondrial and Nuclear Genes-Based Phylogeography of Arvicanthis niloticus (Murinae) and Sub-Saharan Open Habitats Pleistocene History

(2013) Gauthier Dobigny et al.   PLoS One

Continent-wide panmixia of an African fruit bat facilitates transmission of potentially zoonotic viruses

(2013) Alison J. Peel et al.   Nature Communications

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

(2012) R. Peakall et al.   BIOINFORMATICS

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

The Egyptian fruit bat Rousettus aegyptiacus (Chiroptera: Pteropodidae) in the Palaearctic: Geographical variation and taxonomic status

(2012) Petr Benda et al.   BIOLOGIA

Comparative phylogeography of African savannah ungulates1

(2012) E. D. LORENZEN et al.   MOLECULAR ECOLOGY

Environmental margin and island evolution in Middle Eastern populations of the Egyptian fruit bat

(2012) P. Hulva et al.   MOLECULAR ECOLOGY

Molecular systematics and phylogeography of the tribe Myonycterini (Mammalia, Pteropodidae) inferred from mitochondrial and nuclear markers

(2012) Nicolas Nesi et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

An Update of Wallace's Zoogeographic Regions of the World

(2012) B. G. Holt et al.   SCIENCE

Palaeoclimatic events, dispersal and migratory losses along the Afro-European axis as drivers of biogeographic distribution in Sylvia warblers

(2011) Gary Voelker et al.   BMC EVOLUTIONARY BIOLOGY

DNA barcoding of African fruit bats (Mammalia, Pteropodidae). The mitochondrial genome does not provide a reliable discrimination between Epomophorus gambianus and Micropteropus pusillus

(2011) Nicolas Nesi et al.   COMPTES RENDUS BIOLOGIES

Differences in mtDNA whole sequence between Tibetan and Han populations suggesting adaptive selection to high altitude

(2011) Mingliang Gu et al.   GENE

Ecological niche conservatism: a time-structured review of evidence

(2011) A. Townsend Peterson   JOURNAL OF BIOGEOGRAPHY

Rapid parallel evolution of aberrant traits in the diversification of the Gulf of Guinea white-eyes (Aves, Zosteropidae)

(2011) MARTIM MELO et al.   MOLECULAR ECOLOGY

Using species distribution models in paleobiogeography: A matter of data, predictors and concepts

(2011) Sara Varela et al.   PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY

A reconstruction of Palaeo-Macaronesia, with particular reference to the long-term biogeography of the Atlantic island laurel forests

(2010) José María Fernández-Palacios et al.   JOURNAL OF BIOGEOGRAPHY

Phylogeny and biogeography of western Indian OceanRousettus(Chiroptera: Pteropodidae)

(2010) Steven M. Goodman et al.   JOURNAL OF MAMMALOGY

Insights into the biogeographical history of the Lower Guinea Forest Domain: evidence for the role of refugia in the intraspecific differentiation of Aucoumea klaineana

(2010) CÉLINE BORN et al.   MOLECULAR ECOLOGY

Mechanisms of radiation in a bat group from the genus Pipistrellus inferred by phylogeography, demography and population genetics

(2010) P. HULVA et al.   MOLECULAR ECOLOGY

Contrasting Genetic Structure in Two Co-Distributed Species of Old World Fruit Bat

(2010) Jinping Chen et al.   PLoS One

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Predicting the past distribution of species climatic niches

(2009) David Nogués-Bravo   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Hybridization between mouse lemurs in an ecological transition zone in southern Madagascar

(2009) M. GLIGOR et al.   MOLECULAR ECOLOGY

Multiple colonisations of the western Indian Ocean by Pteropus fruit bats (Megachiroptera: Pteropodidae): The furthest islands were colonised first

(2009) John O’Brien et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION