Nitrogen‐dependent bacterial community shifts in root, rhizome and rhizosphere of nutrient‐efficient Miscanthus x giganteus from long‐term field trials

Long-term agronomic practices alter the composition of asymbiotic diazotrophic bacterial community and their nitrogen fixation genes in an acidic red soil

(2018) Weibing Xun et al.   BIOLOGY AND FERTILITY OF SOILS

Impact of long-term agricultural management practices on soil prokaryotic communities

(2018) Doreen Babin et al.   SOIL BIOLOGY & BIOCHEMISTRY

Drought and host selection influence bacterial community dynamics in the grass root microbiome

(2017) Dan Naylor et al.   ISME Journal

Root type and soil phosphate determine the taxonomic landscape of colonizing fungi and the transcriptome of field-grown maize roots

(2017) Peng Yu et al.   NEW PHYTOLOGIST

Endophytic bacteria in Miscanthus seed: implications for germination, vertical inheritance of endophytes, plant evolution and breeding

(2016) Naomi Cope-Selby et al.   Global Change Biology Bioenergy

Bacterial populations in juvenile maize rhizospheres originate from both seed and soil

(2016) David Johnston-Monje et al.   PLANT AND SOIL

Impact of Bacterial–Fungal Interactions on the Colonization of the Endosphere

(2016) Leonard S. van Overbeek et al.   TRENDS IN PLANT SCIENCE

Unlocking the bacterial and fungal communities assemblages of sugarcane microbiome

(2016) Rafael Soares Correa de Souza et al.   Scientific Reports

Roots Shaping Their Microbiome: Global Hotspots for Microbial Activity

(2015) Barbara Reinhold-Hurek et al.   Annual Review of Phytopathology

Microbial 16S gene-based composition of a sorghum cropped rhizosphere soil under different fertilization managements

(2015) Anna Lavecchia et al.   BIOLOGY AND FERTILITY OF SOILS

Yield and quality development comparison between miscanthus and switchgrass over a period of 10 years

(2015) Y. Iqbal et al.   ENERGY

The core root microbiome of sugarcanes cultivated under varying nitrogen fertilizer application

(2015) Yun Kit Yeoh et al.   ENVIRONMENTAL MICROBIOLOGY

Plant and soil effects on bacterial communities associated with Miscanthus  × giganteus rhizosphere and rhizomes

(2015) Dongfang Li et al.   Global Change Biology Bioenergy

Salicylic acid modulates colonization of the root microbiome by specific bacterial taxa

(2015) S. L. Lebeis et al.   SCIENCE

The Soil Microbiome Influences Grapevine-Associated Microbiota

(2015) Iratxe Zarraonaindia et al.   mBio

Induced Systemic Resistance by Beneficial Microbes

(2014) Corné M.J. Pieterse et al.   Annual Review of Phytopathology

An improved dual-indexing approach for multiplexed 16S rRNA gene sequencing on the Illumina MiSeq platform

(2014) Douglas W Fadrosh et al.   Microbiome

Variations in the 15N natural abundance of plant-available N with soil depth: Their influence on estimates of contributions of biological N2 fixation to sugar cane

(2013) Rafael Butke Baptista et al.   APPLIED SOIL ECOLOGY

Contribution of nitrogen fixation to first yearMiscanthus × giganteus

(2013) Daniel P. Keymer et al.   Global Change Biology Bioenergy

Root ethylene signalling is involved in Miscanthus sinensis growth promotion by the bacterial endophyte Herbaspirillum frisingense GSF30T

(2013) Daniel Straub et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptomic and proteomic comparison of two Miscanthus genotypes: high biomass correlates with investment in primary carbon assimilation and decreased secondary metabolism

(2013) Daniel Straub et al.   PLANT AND SOIL

Seasonal dynamics of above- and below-ground biomass and nitrogen partitioning in Miscanthus × giganteus and Panicum virgatum across three growing seasons

(2012) Frank G. Dohleman et al.   Global Change Biology Bioenergy

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Dynamics of Seed-Borne Rice Endophytes on Early Plant Growth Stages

(2012) Pablo R. Hardoim et al.   PLoS One

Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types

(2011) Neil R. Gottel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Nutrient requirements of Miscanthus x giganteus: Conclusions from a review of published studies

(2011) Stéphane Cadoux et al.   BIOMASS & BIOENERGY

Miscanthus × giganteus productivity: the effects of management in different environments

(2011) Matt Maughan et al.   Global Change Biology Bioenergy

Evidence from field nitrogen balance and 15N natural abundance data for the contribution of biological N2 fixation to Brazilian sugarcane varieties

(2011) Segundo Urquiaga et al.   PLANT AND SOIL

Conservation and Diversity of Seed Associated Endophytes in Zea across Boundaries of Evolution, Ethnography and Ecology

(2011) David Johnston-Monje et al.   PLoS One

Soil beneficial bacteria and their role in plant growth promotion: a review

(2010) Rifat Hayat et al.   ANNALS OF MICROBIOLOGY

Two seasons’ study on nifH gene expression and nitrogen fixation by diazotrophic endophytes in sugarcane (Saccharum spp. hybrids): expression of nifH genes similar to those of rhizobia

(2010) Nisarat Thaweenut et al.   PLANT AND SOIL

The communities of endophytic diazotrophic bacteria in cultivated rice (Oryza sativa L.)

(2009) Janpen Prakamhang et al.   APPLIED SOIL ECOLOGY

Comparative Biogeochemical Cycles of Bioenergy Crops Reveal Nitrogen-Fixation and Low Greenhouse Gas Emissions in a Miscanthus × giganteus Agro-Ecosystem

(2009) Sarah C. Davis et al.   ECOSYSTEMS

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

(2009) Gabriele Berg et al.   FEMS MICROBIOLOGY ECOLOGY

Horizontal transfer of the nitrogen fixation gene cluster in the cyanobacterium Microcoleus chthonoplastes

(2009) Henk Bolhuis et al.   ISME Journal

Induced resistance to pests and pathogens in trees

(2009) Alieta Eyles et al.   NEW PHYTOLOGIST

Diversity ofnifHgene pools in the rhizosphere of two cultivars of sorghum (Sorghum bicolor) treated with contrasting levels of nitrogen fertilizer

(2008) Marcia Reed Rodrigues Coelho et al.   FEMS MICROBIOLOGY LETTERS

Growth, yield and mineral content of Miscanthus×giganteus grown as a biofuel for 14 successive harvests

(2008) D.G. Christian et al.   INDUSTRIAL CROPS AND PRODUCTS

Genomic comparison of Bradyrhizobium japonicum strains with different symbiotic nitrogen-fixing capabilities and other Bradyrhizobiaceae members

(2008) Manabu Itakura et al.   ISME Journal

Properties of bacterial endophytes and their proposed role in plant growth

(2008) Pablo R. Hardoim et al.   TRENDS IN MICROBIOLOGY

Comparing annual and perennial energy cropping systems with different management intensities

(2007) Constanze Boehmel et al.   AGRICULTURAL SYSTEMS