Spatial segregation of the biological soil crust microbiome around its foundational cyanobacterium, Microcoleus vaginatus, and the formation of a nitrogen-fixing cyanosphere

Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?

(2018) Joelle Sasse et al.   TRENDS IN PLANT SCIENCE

Large Blooms of Bacillales (Firmicutes) Underlie the Response to Wetting of Cyanobacterial Biocrusts at Various Stages of Maturity

(2018) Ulas Karaoz et al.   mBio

Possible nitrogen fertilization of the early Earth Ocean by microbial continental ecosystems

(2018) Christophe Thomazo et al.   Nature Communications

Linking soil biology and chemistry in biological soil crust using isolate exometabolomics

(2018) Tami L. Swenson et al.   Nature Communications

A novel method to evaluate nutrient retention by biological soil crust exopolymeric matrix

(2017) Tami L. Swenson et al.   PLANT AND SOIL

Microbial Nursery Production of High-Quality Biological Soil Crust Biomass for Restoration of Degraded Dryland Soils

(2016) Sergio Velasco Ayuso et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Plankton networks driving carbon export in the oligotrophic ocean

(2016) Lionel Guidi et al.   NATURE

Visualizing in situ translational activity for identifying and sorting slow-growing archaeal−bacterial consortia

(2016) Roland Hatzenpichler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacteria increase arid-land soil surface temperature through the production of sunscreens

(2016) Estelle Couradeau et al.   Nature Communications

Resource limitation drives spatial organization in microbial groups

(2015) Sara Mitri et al.   ISME Journal

Non-cyanobacterial diazotrophs mediate dinitrogen fixation in biological soil crusts during early crust formation

(2015) Charles Pepe-Ranney et al.   ISME Journal

Ecology and exploration of the rare biosphere

(2015) Michael D. J. Lynch et al.   NATURE REVIEWS MICROBIOLOGY

Production of greenhouse-grown biocrust mosses and associated cyanobacteria to rehabilitate dryland soil function

(2015) Anita Antoninka et al.   RESTORATION ECOLOGY

The ecology of the microbiome: Networks, competition, and stability

(2015) K. Z. Coyte et al.   SCIENCE

Microbial hotspots and hot moments in soil: Concept & review

(2015) Yakov Kuzyakov et al.   SOIL BIOLOGY & BIOCHEMISTRY

Exometabolite niche partitioning among sympatric soil bacteria

(2015) Richard Baran et al.   Nature Communications

Isolation of a significant fraction of non-phototroph diversity from a desert Biological Soil Crust

(2015) Ulisses Nunes da Rocha et al.   Frontiers in Microbiology

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

MODERN TERRESTRIAL SEDIMENTARY BIOSTRUCTURES AND THEIR FOSSIL ANALOGS IN MESOPROTEROZOIC SUBAERIAL DEPOSITS

(2014) H. BERALDI-CAMPESI et al.   PALAIOS

Compartmentalized microbial composition, oxygen gradients and nitrogen fixation in the gut of Odontotaenius disjunctus

(2013) Javier A Ceja-Navarro et al.   ISME Journal

Dynamic cyanobacterial response to hydration and dehydration in a desert biological soil crust

(2013) Lara Rajeev et al.   ISME Journal

Functional Genomics of Novel Secondary Metabolites from Diverse Cyanobacteria Using Untargeted Metabolomics

(2013) Richard Baran et al.   Marine Drugs

Temperature Drives the Continental-Scale Distribution of Key Microbes in Topsoil Communities

(2013) F. Garcia-Pichel et al.   SCIENCE

PANDAseq: paired-end assembler for illumina sequences

(2012) Andre P Masella et al.   BMC BIOINFORMATICS

Microbial diversity of eolian dust sources from saline lake sediments and biological soil crusts in arid Southern Australia

(2012) Raeid M.M. Abed et al.   FEMS MICROBIOLOGY ECOLOGY

Patterns of diversity for fungal assemblages of biological soil crusts from the southwestern United States

(2012) Scott T. Bates et al.   MYCOLOGIA

Contribution of cryptogamic covers to the global cycles of carbon and nitrogen

(2012) Wolfgang Elbert et al.   Nature Geoscience

Aligning short reads to reference alignments and trees

(2011) Simon A. Berger et al.   BIOINFORMATICS

Response and resilience of soil biocrust bacterial communities to chronic physical disturbance in arid shrublands

(2011) Cheryl R Kuske et al.   ISME Journal

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Genome of the Cyanobacterium Microcoleus vaginatusFGP-2, a Photosynthetic Ecosystem Engineer of Arid Land Soil Biocrusts Worldwide

(2011) S. R. Starkenburg et al.   JOURNAL OF BACTERIOLOGY

Activation of Methanogenesis in Arid Biological Soil Crusts Despite the Presence of Oxygen

(2011) Roey Angel et al.   PLoS One

Performance, Accuracy, and Web Server for Evolutionary Placement of Short Sequence Reads under Maximum Likelihood

(2011) Simon A. Berger et al.   SYSTEMATIC BIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Fungal communities of lichen-dominated biological soil crusts: Diversity, relative microbial biomass, and their relationship to disturbance and crust cover

(2010) Scott T. Bates et al.   JOURNAL OF ARID ENVIRONMENTS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Emergence of Spatial Structure in Cell Groups and the Evolution of Cooperation

(2010) Carey D. Nadell et al.   PLoS Computational Biology

Archaeal populations in biological soil crusts from arid lands in North America

(2009) Tanya Soule et al.   SOIL BIOLOGY & BIOCHEMISTRY