A Large-Scale Genome-Wide Association Analyses of Ethiopian Sorghum Landrace Collection Reveal Loci Associated With Important Traits

The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization

(2017) Ryan F. McCormick et al.   PLANT JOURNAL

Phenology, sterility and inheritance of two environment genic male sterile (EGMS) lines for hybrid rice

(2017) R. El-Namaky et al.   Rice

CLAVATA1 controls distinct signaling outputs that buffer shoot stem cell proliferation through a two-step transcriptional compensation loop

(2017) Zachary L. Nimchuk   PLoS Genetics

Mapping and Preliminary Analysis of ABORTED MICROSPORES (AMS) as the Candidate Gene Underlying the Male Sterility (MS-5) Mutant in Melon (Cucumis melo L.)

(2017) Yunyan Sheng et al.   Frontiers in Plant Science

Cloning, molecular evolution and functional characterization of ZmbHLH16, the maize ortholog of OsTIP2 (OsbHLH142)

(2017) Yongming Liu et al.   Biology Open

Characterisation of the nicotianamine aminotransferase and deoxymugineic acid synthase genes essential to Strategy II iron uptake in bread wheat (Triticum aestivum L.)

(2017) Jesse T. Beasley et al.   PLoS One

Three dominant awnless genes in common wheat: Fine mapping, interaction and contribution to diversity in awn shape and length

(2017) Motohiro Yoshioka et al.   PLoS One

A Genomic Resource for the Development, Improvement, and Exploitation of Sorghum for Bioenergy

(2016) Zachary W. Brenton et al.   GENETICS

Costs and benefits of awns

(2016) Zifeng Guo et al.   JOURNAL OF EXPERIMENTAL BOTANY

Identification and characterization of wheat drought-responsive MYB transcription factors involved in the regulation of cuticle biosynthesis

(2016) Huihui Bi et al.   JOURNAL OF EXPERIMENTAL BOTANY

RWP-RK domain-containing transcription factors control cell differentiation during female gametophyte development in Arabidopsis

(2016) Francesca Tedeschi et al.   NEW PHYTOLOGIST

The LSM1-7 Complex Differentially Regulates Arabidopsis Tolerance to Abiotic Stress Conditions by Promoting Selective mRNA Decapping

(2016) Carlos Perea-Resa et al.   PLANT CELL

Fine mapping of a major QTL for awn length in barley using a multiparent mapping population

(2016) Corinna B. Liller et al.   THEORETICAL AND APPLIED GENETICS

Genome-Wide Association Study for Nine Plant Architecture Traits in Sorghum

(2016) Jing Zhao et al.   Plant Genome

GAPIT Version 2: An Enhanced Integrated Tool for Genomic Association and Prediction

(2016) You Tang et al.   Plant Genome

A Genomic Resource for the Development, Improvement, and Exploitation of Sorghum for Bioenergy

(2016) Zachary W. Brenton et al.   GENETICS

Identification of Dw1, a Regulator of Sorghum Stem Internode Length

(2016) Josie Hilley et al.   PLoS One

Sorghum Dw1, an agronomically important gene for lodging resistance, encodes a novel protein involved in cell proliferation

(2016) Miki Yamaguchi et al.   Scientific Reports

Genome-wide identification and characterization of MADS-box family genes related to organ development and stress resistance in Brassica rapa

(2015) Gopal Saha et al.   BMC GENOMICS

A tomato chloroplast-targeted DnaJ protein protects Rubisco activity under heat stress

(2015) Guodong Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Dissecting repulsion linkage in the dwarfing geneDw3region for sorghum plant height provides insights into heterosis

(2015) Xin Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transcriptional control of flavonoid biosynthesis by MYB–bHLH–WDR complexes

(2015) Wenjia Xu et al.   TRENDS IN PLANT SCIENCE

Genome-Wide Association Study on Resistance to Stalk Rot Diseases in Grain Sorghum

(2015) A. Adeyanju et al.   G3-Genes Genomes Genetics

Abiotic stress responses in plants: roles of calmodulin-regulated proteins

(2015) Amardeep S. Virdi et al.   Frontiers in Plant Science

The Light-Harvesting Chlorophyll a/b Binding Proteins Lhcb1 and Lhcb2 Play Complementary Roles during State Transitions in Arabidopsis

(2014) M. Pietrzykowska et al.   PLANT CELL

TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline

(2014) Jeffrey C. Glaubitz et al.   PLoS One

Methylation Affects Transposition and Splicing of a Large CACTA Transposon from a MYB Transcription Factor Regulating Anthocyanin Synthase Genes in Soybean Seed Coats

(2014) Gracia Zabala et al.   PLoS One

Analysis of in situ diversity and population structure in Ethiopian cultivated Sorghum bicolor (L.) landraces using phenotypic traits and SSR markers

(2014) Asfaw Adugna   SpringerPlus

The advantages and limitations of trait analysis with GWAS: a review

(2013) Arthur Korte et al.   Plant Methods

BEAK-SHAPED GRAIN 1/TRIANGULAR HULL 1, a DUF640 gene, is associated with grain shape, size and weight in rice

(2013) DaWei Yan et al.   Science China-Life Sciences

Dissecting Genome-Wide Association Signals for Loss-of-Function Phenotypes in Sorghum Flavonoid Pigmentation Traits

(2013) Geoffrey P. Morris et al.   G3-Genes Genomes Genetics

The plastid-localized pfkB-type carbohydrate kinases FRUCTOKINASE-LIKE 1 and 2 are essential for growth and development of Arabidopsis thaliana

(2012) Jonathan Gilkerson et al.   BMC PLANT BIOLOGY

Genome-wide association study (GWAS) of resistance to head smut in maize

(2012) Ming Wang et al.   PLANT SCIENCE

Hyperdiversity of Genes Encoding Integral Light-Harvesting Proteins in the Dinoflagellate Symbiodinium sp

(2012) Lynda Boldt et al.   PLoS One

Presence of tannins in sorghum grains is conditioned by different natural alleles of Tannin1

(2012) Y. Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Population genomic and genome-wide association studies of agroclimatic traits in sorghum

(2012) G. P. Morris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genotyping-by-Sequencing for Plant Breeding and Genetics

(2012) Jesse A. Poland et al.   Plant Genome

A Comparison of Association Methods Correcting for Population Stratification in Case-Control Studies

(2011) Chengqing Wu et al.   ANNALS OF HUMAN GENETICS

Enhancements to the ADMIXTURE algorithm for individual ancestry estimation

(2011) David H Alexander et al.   BMC BIOINFORMATICS

Plant Stem Cell Signaling Involves Ligand-Dependent Trafficking of the CLAVATA1 Receptor Kinase

(2011) Zachary L. Nimchuk et al.   CURRENT BIOLOGY

Phytozome: a comparative platform for green plant genomics

(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Genome-wide association studies in plants: the missing heritability is in the field

(2011) Benjamin Brachi et al.   GENOME BIOLOGY

Flavonoid Phytoalexin-Dependent Resistance to Anthracnose Leaf Blight Requires a Functional yellow seed1 in Sorghum bicolor

(2010) F. Ibraheem et al.   GENETICS

Regulation of aleurone development in cereal grains

(2010) P. W. Becraft et al.   JOURNAL OF EXPERIMENTAL BOTANY

Mixed linear model approach adapted for genome-wide association studies

(2010) Zhiwu Zhang et al.   NATURE GENETICS

Location of major effect genes in sorghum (Sorghum bicolor (L.) Moench)

(2010) E. S. Mace et al.   THEORETICAL AND APPLIED GENETICS

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE