Identifying Gut Microbiota Associated With Colorectal Cancer Using a Zero-Inflated Lognormal Model
Published 2019 View Full Article
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Title
Identifying Gut Microbiota Associated With Colorectal Cancer Using a Zero-Inflated Lognormal Model
Authors
Keywords
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Journal
Frontiers in Microbiology
Volume 10, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2019-04-24
DOI
10.3389/fmicb.2019.00826
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Note: Only part of the references are listed.- BNPMDA: Bipartite Network Projection for MiRNA–Disease Association prediction
- (2018) Xing Chen et al. BIOINFORMATICS
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- (2018) Xing Chen et al. BIOINFORMATICS
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- (2018) Huan Hu et al. RNA Biology
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- (2018) Domenica Rea et al. Oncotarget
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- (2018) Qi Zhao et al. Frontiers in Genetics
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- (2018) Qi Zhao et al. PROTEIN AND PEPTIDE LETTERS
- Shifts of Faecal Microbiota During Sporadic Colorectal Carcinogenesis
- (2018) Giorgia Mori et al. Scientific Reports
- MDHGI: Matrix Decomposition and Heterogeneous Graph Inference for miRNA-disease association prediction
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- (2018) Qi Zhao et al. Molecular Therapy-Nucleic Acids
- Race-dependent association of sulfidogenic bacteria with colorectal cancer
- (2017) Cemal Yazici et al. GUT
- Prediction of microbe–disease association from the integration of neighbor and graph with collaborative recommendation model
- (2017) Yu-An Huang et al. Journal of Translational Medicine
- LPI-ETSLP: lncRNA–protein interaction prediction using eigenvalue transformation-based semi-supervised link prediction
- (2017) Huan Hu et al. Molecular BioSystems
- A human stool-derived Bilophila wadsworthia strain caused systemic inflammation in specific-pathogen-free mice
- (2017) Zhou Feng et al. Gut Pathogens
- LRSSLMDA: Laplacian Regularized Sparse Subspace Learning for MiRNA-Disease Association prediction
- (2017) Xing Chen et al. PLoS Computational Biology
- PBHMDA: Path-Based Human Microbe-Disease Association Prediction
- (2017) Zhi-An Huang et al. Frontiers in Microbiology
- Fecal metagenomic profiles in subgroups of patients with myalgic encephalomyelitis/chronic fatigue syndrome
- (2017) Dorottya Nagy-Szakal et al. Microbiome
- Gut Microbiota, Inflammation, and Colorectal Cancer
- (2016) Caitlin A. Brennan et al. Annual Review of Microbiology
- A novel approach based on KATZ measure to predict associations of human microbiota with non-infectious diseases
- (2016) Xing Chen et al. BIOINFORMATICS
- A two-part mixed-effects model for analyzing longitudinal microbiome compositional data
- (2016) Eric Z. Chen et al. BIOINFORMATICS
- Long non-coding RNAs and complex diseases: from experimental results to computational models
- (2016) Xing Chen et al. BRIEFINGS IN BIOINFORMATICS
- Correlation detection strategies in microbial data sets vary widely in sensitivity and precision
- (2016) Sophie Weiss et al. ISME Journal
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- The Common Gut Microbe Eubacterium hallii also Contributes to Intestinal Propionate Formation
- (2016) Christina Engels et al. Frontiers in Microbiology
- The gut microbiota in conventional and serrated precursors of colorectal cancer
- (2016) Brandilyn A. Peters et al. Microbiome
- A robust approach for identifying differentially abundant features in metagenomic samples
- (2015) Michael B. Sohn et al. BIOINFORMATICS
- Zero-Inflated Beta Regression for Differential Abundance Analysis with Metagenomics Data
- (2015) Xiaoling Peng et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- The Human Gut Microbiome as a Screening Tool for Colorectal Cancer
- (2014) J. P. Zackular et al. Cancer Prevention Research
- Activation of Gpr109a, Receptor for Niacin and the Commensal Metabolite Butyrate, Suppresses Colonic Inflammation and Carcinogenesis
- (2014) Nagendra Singh et al. IMMUNITY
- Potential of fecal microbiota for early-stage detection of colorectal cancer
- (2014) G. Zeller et al. Molecular Systems Biology
- Novel human lncRNA–disease association inference based on lncRNA expression profiles
- (2013) Xing Chen et al. BIOINFORMATICS
- The subgingival microbiome in health and periodontitis and its relationship with community biomass and inflammation
- (2013) Loreto Abusleme et al. ISME Journal
- Gut Microbiota Composition Modifies Fecal Metabolic Profiles in Mice
- (2013) Ying Zhao et al. JOURNAL OF PROTEOME RESEARCH
- Human Gut Microbiome and Risk for Colorectal Cancer
- (2013) Jiyoung Ahn et al. JNCI-Journal of the National Cancer Institute
- Differential abundance analysis for microbial marker-gene surveys
- (2013) Joseph N Paulson et al. NATURE METHODS
- The gut microbiota — masters of host development and physiology
- (2013) Felix Sommer et al. NATURE REVIEWS MICROBIOLOGY
- Signaling pathways bridging microbial-triggered inflammation and cancer
- (2012) Maulilio John Kipanyula et al. CELLULAR SIGNALLING
- Human Intestinal Lumen and Mucosa-Associated Microbiota in Patients with Colorectal Cancer
- (2012) Weiguang Chen et al. PLoS One
- Molecular-Phylogenetic Characterization of the Microbiota in Ulcerated and Non-Ulcerated Regions in the Patients with Crohn's Disease
- (2012) Qiurong Li et al. PLoS One
- Genomic analysis identifies association of Fusobacterium with colorectal carcinoma
- (2011) A. D. Kostic et al. GENOME RESEARCH
- Accurate Genome Relative Abundance Estimation Based on Shotgun Metagenomic Reads
- (2011) Li C. Xia et al. PLoS One
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
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