Whole Genome Sequencing and Metabolomic Study of Cave Streptomyces Isolates ICC1 and ICC4

BAGEL4: a user-friendly web server to thoroughly mine RiPPs and bacteriocins

(2018) Auke J van Heel et al.   NUCLEIC ACIDS RESEARCH

Fe(III) Reducing Microorganisms from Iron Ore Caves Demonstrate Fermentative Fe(III) Reduction and Promote Cave Formation

(2017) Ceth W. Parker et al.   GEOMICROBIOLOGY JOURNAL

A Simple Defined Medium for the Production of True Diketopiperazines in Xylella fastidiosa and Their Identification by Ultra-Fast Liquid Chromatography-Electrospray Ionization Ion Trap Mass Spectrometry

(2017) Michelli Massaroli da Silva et al.   MOLECULES

Assessment of the Potential Role of Streptomyces in Cave Moonmilk Formation

(2017) Marta Maciejewska et al.   Frontiers in Microbiology

Western Bats as a Reservoir of Novel Streptomyces Species with Antifungal Activity

(2016) Paris S. Hamm et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

BAGEL: a computational framework for identifying essential genes from pooled library screens

(2016) Traver Hart et al.   BMC BIOINFORMATICS

Next Generation Sequencing of Actinobacteria for the Discovery of Novel Natural Products

(2016) Juan Gomez-Escribano et al.   Marine Drugs

The evolution of genome mining in microbes – a review

(2016) Nadine Ziemert et al.   NATURAL PRODUCT REPORTS

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

(2016) Mingxun Wang et al.   NATURE BIOTECHNOLOGY

Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center

(2016) Alice R. Wattam et al.   NUCLEIC ACIDS RESEARCH

A Phenotypic and Genotypic Analysis of the Antimicrobial Potential of Cultivable Streptomyces Isolated from Cave Moonmilk Deposits

(2016) Marta Maciejewska et al.   Frontiers in Microbiology

Actinobacteria Isolated from an Underground Lake and Moonmilk Speleothem from the Biggest Conglomeratic Karstic Cave in Siberia as Sources of Novel Biologically Active Compounds

(2016) Denis V. Axenov-Gibanov et al.   PLoS One

Extracting Accurate Precursor Information for Tandem Mass Spectra by RawConverter

(2015) Lin He et al.   ANALYTICAL CHEMISTRY

Minimum Information about a Biosynthetic Gene cluster

(2015) Marnix H Medema et al.   Nature Chemical Biology

antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters

(2015) Tilmann Weber et al.   NUCLEIC ACIDS RESEARCH

Metalliferous Biosignatures for Deep Subsurface Microbial Activity

(2015) John Parnell et al.   ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES

Actinobacterial diversity in limestone deposit sites in Hundung, Manipur (India) and their antimicrobial activities

(2015) Salam Nimaichand et al.   Frontiers in Microbiology

Microbially induced corrosion of carbon steel in deep groundwater environment

(2015) Pauliina Rajala et al.   Frontiers in Microbiology

Marinobacter subterrani, a genetically tractable neutrophilic Fe(II)-oxidizing strain isolated from the Soudan Iron Mine

(2015) Benjamin M. Bonis et al.   Frontiers in Microbiology

Deep subsurface mine stalactites trap endemic fissure fluid Archaea, Bacteria, and Nematoda possibly originating from ancient seas

(2015) Gaëtan Borgonie et al.   Frontiers in Microbiology

Profiling bacterial diversity in a limestone cave of the western Loess Plateau of China

(2015) Yucheng Wu et al.   Frontiers in Microbiology

Microbiome composition and geochemical characteristics of deep subsurface high-pressure environment, Pyhäsalmi mine Finland

(2015) Hanna Miettinen et al.   Frontiers in Microbiology

Nitrate and ammonia as nitrogen sources for deep subsurface microorganisms

(2015) Heini Kutvonen et al.   Frontiers in Microbiology

Diversity and role of plasmids in adaptation of bacteria inhabiting the Lubin copper mine in Poland, an environment rich in heavy metals

(2015) Lukasz Dziewit et al.   Frontiers in Microbiology

In vitro antimicrobial, antioxidant and cytotoxic properties of Streptomyces lavendulae strain SCA5

(2014) Pachaiyappan Saravana Kumar et al.   BMC MICROBIOLOGY

Diversity and Antimicrobial Activities of Actinobacteria Isolated from Tropical Mangrove Sediments in Malaysia

(2014) Learn-Han Lee et al.   TheScientificWorldJOURNAL

Antifungal Activity of Diketopiperazines and Stilbenes Against Plant Pathogenic Fungi In Vitro

(2013) S. Nishanth Kumar et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

S-Michael Additions to Chiral Dehydroalanines as an Entry to Glycosylated Cysteines and a Sulfa-Tn Antigen Mimic

(2013) Carlos Aydillo et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Cure from the cave: volcanic cave actinomycetes and their potential in drug discovery

(2012) Naowarat Cheeptham et al.   INTERNATIONAL JOURNAL OF SPELEOLOGY

The nonribosomal synthesis of diketopiperazines in tRNA-dependent cyclodipeptide synthase pathways

(2012) Pascal Belin et al.   NATURAL PRODUCT REPORTS

Antibiotic Resistance Is Prevalent in an Isolated Cave Microbiome

(2012) Kirandeep Bhullar et al.   PLoS One

Lava Cave Microbial Communities Within Mats and Secondary Mineral Deposits: Implications for Life Detection on Other Planets

(2011) D.E. Northup et al.   ASTROBIOLOGY

In silico analysis highlights the frequency and diversity of type 1 lantibiotic gene clusters in genome sequenced bacteria

(2010) Alan J Marsh et al.   BMC GENOMICS

Siderophores from Neighboring Organisms Promote the Growth of Uncultured Bacteria

(2010) Anthony D'Onofrio et al.   CHEMISTRY & BIOLOGY

Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria

(2009) Kevin Penn et al.   ISME Journal

The role of absC, a novel regulatory gene for secondary metabolism, in zinc-dependent antibiotic production in Streptomyces coelicolor A3(2)

(2009) Andy Hesketh et al.   MOLECULAR MICROBIOLOGY

Biosynthesis of Diazepinomicin/ECO-4601, aMicromonosporaSecondary Metabolite with a Novel Ring System

(2008) James B. McAlpine et al.   JOURNAL OF NATURAL PRODUCTS